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Measuring similarity between complex objects is a fundamental task in many scientific fields. When objects are represented as graphs, graph similarity/distance measures offer a powerful framework for quantifying structural resemblance.…

Combinatorics · Mathematics 2025-09-30 Matthias Dehmer , Izudin Redžepović , Niko Tratnik , Petra Žigert Pleteršek

Protein-protein interaction (PPI) networks, providing a comprehensive landscape of protein interacting patterns, enable us to explore biological processes and cellular components at multiple resolutions. For a biological process, a number…

Molecular Networks · Quantitative Biology 2016-04-13 Xiuli Ma , Guangyu Zhou , Jingjing Wang , Jian Peng , Jiawei Han

Cohesive subgraph discovery in a network is one of the fundamental problems and investigated for several decades. In this paper, we propose the Overlapping Cohesive Subgraphs with Minimum degree (OCSM) problem which combines three key…

Social and Information Networks · Computer Science 2022-06-13 Junghoon Kim , Sungsu Lim , Jungeun Kim

Subgraph matching is a fundamental building block for graph-based applications and is challenging due to its high-order combinatorial nature. Existing studies usually tackle it by combinatorial optimization or learning-based methods.…

Machine Learning · Computer Science 2023-06-13 Xuanzhou Liu , Lin Zhang , Jiaqi Sun , Yujiu Yang , Haiqin Yang

Computing a dense subgraph is a fundamental problem in graph mining, with a diverse set of applications ranging from electronic commerce to community detection in social networks. In many of these applications, the underlying context is…

Data Structures and Algorithms · Computer Science 2022-04-19 Suman K. Bera , Sayan Bhattacharya , Jayesh Choudhari , Prantar Ghosh

In standard graph clustering/community detection, one is interested in partitioning the graph into more densely connected subsets of nodes. In contrast, the "search" problem of this paper aims to only find the nodes in a "single" such…

Social and Information Networks · Computer Science 2018-06-22 Avik Ray , Sujay Sanghavi , Sanjay Shakkottai

The study of complex networks has significantly advanced our understanding of community structures which serves as a crucial feature of real-world graphs. Detecting communities in graphs is a challenging problem with applications in…

Social and Information Networks · Computer Science 2024-07-15 Jiakang Li , Songning Lai , Zhihao Shuai , Yuan Tan , Yifan Jia , Mianyang Yu , Zichen Song , Xiaokang Peng , Ziyang Xu , Yongxin Ni , Haifeng Qiu , Jiayu Yang , Yutong Liu , Yonggang Lu

The densest $k$-subgraph problem is the problem of finding a $k$-vertex subgraph of a graph with the maximum number of edges. In order to solve large instances of the densest $k$-subgraph problem, we introduce two algorithms that are based…

Optimization and Control · Mathematics 2019-01-21 Renata Sotirov

This paper presents a graph bundling algorithm that agglomerates edges taking into account both spatial proximity as well as user-defined criteria in order to reveal patterns that were not perceivable with previous bundling techniques. Each…

Graphics · Computer Science 2015-04-13 Daniel C. Moura

Graph searching is one of the simplest and most widely used tools in graph algorithms. Every graph search method is defined using some particular selection rule, and the analysis of the corresponding vertex orderings can aid greatly in…

Discrete Mathematics · Computer Science 2021-09-07 Matjaž Krnc , Nevena Pivač

Community detection is a widely-studied unsupervised learning problem in which the task is to group similar entities together based on observed pairwise entity interactions. This problem has applications in diverse domains such as social…

Social and Information Networks · Computer Science 2020-04-21 Jimit Majmudar , Stephen Vavasis

We present an exact algorithm for computing all common subgraphs with the maximum number of vertices across multiple graphs. Our approach is further extended to handle the connected Maximum Common Subgraph (MCS), identifying the largest…

Data Structures and Algorithms · Computer Science 2025-04-03 Johannes B. S. Petersen , Akbar Davoodi , Thomas Gärtner , Marc Hellmuth , Daniel Merkle

Graphs are a fundamental data structure used to represent relationships in domains as diverse as the social sciences, bioinformatics, cybersecurity, the Internet, and more. One of the central observations in network science is that…

Social and Information Networks · Computer Science 2024-07-25 Sabyasachi Basu , Daniel Paul-Pena , Kun Qian , C. Seshadhri , Edward W Huang , Karthik Subbian

Graph mining analyzes real-world graphs to find core substructures (connected subgraphs) in applications modeled as graphs. Substructure discovery is a process that involves identifying meaningful patterns, structures, or components within…

Social and Information Networks · Computer Science 2025-04-29 Arshdeep Singh , Abhishek Santra , Sharma Chakravarthy

Community detection, the decomposition of a graph into essential building blocks, has been a core research topic in network science over the past years. Since a precise notion of what constitutes a community has remained evasive, community…

Social and Information Networks · Computer Science 2017-02-17 Michael T. Schaub , Jean-Charles Delvenne , Martin Rosvall , Renaud Lambiotte

One way of characterizing the topological and structural properties of vertices and edges in a graph is by using structural similarity measures. Measures like Cosine, Jaccard and Dice compute the similarities restricted to the immediate…

Social and Information Networks · Computer Science 2018-05-04 Eduar Castrillo , Elizabeth León , Jonatan Gómez

Massive network exploration is an important research direction with many applications. In such a setting, the network is, usually, modeled as a graph $G$, whereas any structural information of interest is extracted by inspecting the way…

Data Structures and Algorithms · Computer Science 2017-12-11 Panagiotis Strouthopoulos , Apostolos Papadopoulos

In this paper, we propose the differentiable channel sparsity search (DCSS) for convolutional neural networks. Unlike traditional channel pruning algorithms which require users to manually set prune ratios for each convolutional layer, DCSS…

Computer Vision and Pattern Recognition · Computer Science 2022-01-06 Yu Zhao , Chung-Kuei Lee

Subgraph listing is a fundamental problem in graph theory and has wide applications in areas like sociology, chemistry, and social networks. Modern graphs can usually be large-scale as well as highly dynamic, which challenges the efficiency…

Databases · Computer Science 2020-09-01 Xun Jian , Yue Wang , Xiayu Lei , Yanyan Shen , Lei Chen

We study the detection and the reconstruction of a large very dense subgraph in a social graph with $n$ nodes and $m$ edges given as a stream of edges, when the graph follows a power law degree distribution, in the regime when $m=O(n. \log…

Data Structures and Algorithms · Computer Science 2023-06-22 Claire Mathieu , Michel de Rougemont
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