Related papers: Linear-Time Algorithm for Long LCF with $k$ Mismat…

The problem of finding longest common subsequence (LCS) is one of the fundamental problems in computer science, which finds application in fields such as computational biology, text processing, information retrieval, data compression etc.…

Dang et al. have given an algorithm that can find a Tarski fixed point in a $k$-dimensional lattice of width $n$ using $O(\log^{k} n)$ queries. Multiple authors have conjectured that this algorithm is optimal [Dang et al., Etessami et al.],…

We give a simple deterministic $O(\log K / \log\log K)$ approximation algorithm for the Min-Max Selecting Items problem, where $K$ is the number of scenarios. While our main goal is simplicity, this result also improves over the previous…

We consider the problem of indexing a string $t$ of length $n$ to report the occurrences of a query pattern $p$ containing $m$ characters and $j$ wildcards. Let $occ$ be the number of occurrences of $p$ in $t$, and $\sigma$ the size of the…

In this paper, we study for the first time the Diverse Longest Common Subsequences (LCSs) problem under Hamming distance. Given a set of a constant number of input strings, the problem asks to decide if there exists some subset $\mathcal X$…

Given a directed graph $G$ and a parameter $k$, the {\sc Long Directed Cycle (LDC)} problem asks whether $G$ contains a simple cycle on at least $k$ vertices, while the {\sc $k$-Path} problems asks whether $G$ contains a simple path on…

Given a pattern $P$ and a text $T$, both strings over a binary alphabet, the binary jumbled string matching problem consists in telling whether any permutation of $P$ occurs in $T$. The indexed version of this problem, i.e., preprocessing a…

We study the design of fixed-parameter algorithms for problems already known to be solvable in polynomial time. The main motivation is to get more efficient algorithms for problems with unattractive polynomial running times. Here, we focus…

This paper discusses the problem of covering and hitting a set of line segments $\cal L$ in ${\mathbb R}^2$ by a pair of axis-parallel squares such that the side length of the larger of the two squares is minimized. We also discuss the…

We consider the problem of maintaining a collection of strings while efficiently supporting splits and concatenations on them, as well as comparing two substrings, and computing the longest common prefix between two suffixes. This problem…

We propose a first-order augmented Lagrangian algorithm (FALC) to solve the composite norm minimization problem min |sigma(F(X)-G)|_alpha + |C(X)- d|_beta subject to A(X)-b in Q; where sigma(X) denotes the vector of singular values of X,…

In the classical longest palindromic substring (LPS) problem, we are given a string $S$ of length $n$, and the task is to output a longest palindromic substring in $S$. Gilbert, Hajiaghayi, Saleh, and Seddighin [SPAA 2023] showed how to…

We give a sublinear quantum algorithm for the longest common substring (LCS) problem on the run-length encoded (RLE) inputs, under the assumption that the prefix-sums of the runs are given. Our algorithm costs $\tilde{O}(n^{5/6})\cdot…

In this paper we study lower bounds for the fundamental problem of text indexing with mismatches and differences. In this problem we are given a long string of length $n$, the "text", and the task is to preprocess it into a data structure…

We call a CNF formula linear if any two clauses have at most one variable in common. Let Linear k-SAT be the problem of deciding whether a given linear k-CNF formula is satisfiable. Here, a k-CNF formula is a CNF formula in which every…

In this paper we address the longest common extension (LCE) problem: to compute the length $\ell$ of the longest common prefix between any two suffixes of $T\in \Sigma^n$ with $ \Sigma = \{0, \ldots \sigma-1\} $. We present two fast and…

We here study Max Hamming XSAT, ie, the problem of finding two XSAT models at maximum Hamming distance. By using a recent XSAT solver as an auxiliary function, an O(1.911^n) time algorithm can be constructed, where n is the number of…

We consider the \emph{approximate minimum selection} problem in presence of \emph{independent random comparison faults}. This problem asks to select one of the smallest $k$ elements in a linearly-ordered collection of $n$ elements by only…

We consider the problem of dictionary matching in a stream. Given a set of strings, known as a dictionary, and a stream of characters arriving one at a time, the task is to report each time some string in our dictionary occurs in the…

Finding maximum-cardinality matchings in undirected graphs is arguably one of the most central graph problems. For general m-edge and n-vertex graphs, it is well-known to be solvable in $O(m \sqrt{n})$ time. We develop a linear-time…