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We describe an approach for identifying groups of dynamically similar locations in spatial time-series data based on a simple Markov transition model. We give maximum-likelihood, empirical Bayes, and fully Bayesian formulations of the…

Quantitative Methods · Quantitative Biology 2013-06-24 Edward B. Baskerville , Trevor Bedford , Robert C. Reiner , Mercedes Pascual

Accurate and reliable forecasting of epidemic incidences is critical for public health preparedness, yet it remains a challenging task due to complex nonlinear temporal dependencies and heterogeneous spatial interactions. Often, point…

Machine Learning · Statistics 2026-03-10 Rajdeep Pathak , Tanujit Chakraborty

The visual modeling method enables flexible interactions with rich graphical depictions of data and supports the exploration of the complexities of epidemiological analysis. However, most epidemiology visualizations do not support the…

Applications · Statistics 2023-04-25 Yu Dong , Christy Jie Liang , Yi Chen , Jie Hua

Developing methods to analyse infection spread is an important step in the study of pandemic and containing them. The principal mode for geographical spreading of pandemics is the movement of population across regions. We are interested in…

Adaptation and Self-Organizing Systems · Physics 2022-11-11 Sudeepini Darapu , Subrata Ghosh , Abhishek Senapati , Chittaranjan Hens , Santosh Nannuru

Epidemic modeling is an essential tool to understand the spread of the novel coronavirus and ultimately assist in disease prevention, policymaking, and resource allocation. In this article, we establish a state of the art interface between…

Applications · Statistics 2020-12-17 Li Wang , Guannan Wang , Lei Gao , Xinyi Li , Shan Yu , Myungjin Kim , Yueying Wang , Zhiling Gu

With the outbreak of the COVID-19 pandemic, various studies have focused on predicting the trajectory and risk factors of the virus and its variants. Building on previous work that addressed this problem using genetic and epidemiological…

Applications · Statistics 2023-12-25 Catherine Li , Daniel Lazarev

Prediction of the progression of an infectious disease outbreak is important for planning and coordinating a response. Differential equations are often used to model an epidemic outbreak's behaviour but are challenging to parameterise.…

Populations and Evolution · Quantitative Biology 2022-03-16 David Wu , Helen Petousis-Harris , Janine Paynter , Vinod Suresh , Oliver J. Maclaren

Mathematical models represent one of the fundamental ways of studying nature. In special, epidemic models have shown to be particularly useful in the understanding of the course of diseases and in the planning effective control policies. A…

Physics and Society · Physics 2022-10-19 Paulo C. Ventura , Eric K. Tokuda , Luciano da F. Costa , Francisco A. Rodrigues

Ambient air pollution poses significant health and environmental challenges. Exposure to high concentrations of PM$_{2.5}$ have been linked to increased respiratory and cardiovascular hospital admissions, more emergency department visits…

Applications · Statistics 2026-02-27 Zeinab Mohamed , Wenlong Gong

Graphical modeling explores dependences among a collection of variables by inferring a graph that encodes pairwise conditional independences. For jointly Gaussian variables, this translates into detecting the support of the precision…

Methodology · Statistics 2018-02-16 Shota Katayama , Hironori Fujisawa , Mathias Drton

Spatio-temporal disease mapping models are commonly used to estimate the relative risk of a disease over time and across areas. For each area and time point, the disease count is modelled with a Poisson distribution whose mean is the…

Methodology · Statistics 2024-04-16 Victoire Michal , Alexandra M. Schmidt

Using former maps, geographers intend to study the evolution of the land cover in order to have a prospective approach on the future landscape; predictions of the future land cover, by the use of older maps and environmental variables, are…

Improving health worldwide will require rigorous quantification of population-level trends in health status. However, global-level surveys are not available, forcing researchers to rely on fragmentary country-specific data of varying…

Methodology · Statistics 2014-05-20 Mariel M. Finucane , Christopher J. Paciorek , Goodarz Danaei , Majid Ezzati

Treatment of stagnant water bodies that act as a breeding site for malarial vectors is a fundamental step in most malaria elimination campaigns. However, identification of such water bodies over large areas is expensive, labour-intensive…

Machine Learning · Computer Science 2024-07-17 Aishwarya Jadhav

This paper extends Bayesian mortality projection models for multiple populations considering the stochastic structure and the effect of spatial autocorrelation among the observations. We explain high levels of overdispersion according to…

Methodology · Statistics 2021-03-08 Zhen Liu , Xiaoqian Sun , Yu-Bo Wang

One of the main causes of death around the globe is malaria. Researchers have sought to develop predictive models for malaria outbreaks based on meteorological data, climate data and the breeding cycle of Plasmodium, the causative agent of…

Other Quantitative Biology · Quantitative Biology 2026-05-20 Mary Opokua Ansong , Asare Yaw Obeng , Samuel King Opoku

Time elapsed till an event of interest is often modeled using the survival analysis methodology, which estimates a survival score based on the input features. There is a resurgence of interest in developing more accurate prediction models…

Machine Learning · Computer Science 2024-07-23 Navid Seidi , Ardhendu Tripathy , Sajal K. Das

Gaussian graphical models are used for determining conditional relationships between variables. This is accomplished by identifying off-diagonal elements in the inverse-covariance matrix that are non-zero. When the ratio of variables (p) to…

Applications · Statistics 2018-08-07 Donald R. Williams , Juho Piironen , Aki Vehtari , Philippe Rast

For highly sensitive real-world predictive analytic applications such as healthcare and medicine, having good prediction accuracy alone is often not enough. These kinds of applications require a decision making process which uses…

Machine Learning · Computer Science 2018-04-02 Djordje Gligorijevic , Jelena Stojanovic , Zoran Obradovic

Current analysis of astronomical data are confronted with the daunting task of modeling the awkward features of astronomical data, among which heteroscedastic (point-dependent) errors, intrinsic scatter, non-ignorable data collection…

Instrumentation and Methods for Astrophysics · Physics 2011-12-19 S. Andreon
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