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Fluorescence microscopy is a widely used method among cell biologists for studying the localization and co-localization of fluorescent protein. For microbial cell biologists, these studies often include tedious and time-consuming manual…

Computer Vision and Pattern Recognition · Computer Science 2020-09-29 Jonathan Reiner , Guy Azran , Gal Hyams

Cryo-electron microscopy (cryo-EM) is a powerful technique in structural biology and drug discovery, enabling the study of biomolecules at high resolution. Significant advancements by structural biologists using cryo-EM have led to the…

Biomolecules · Quantitative Biology 2024-12-05 Yi Zhou , Yilai Li , Jing Yuan , Quanquan Gu

To ensure homogeneous conditions within the complete area of perfused microfluidic bio-reactors, we develop a general design of a continuously feed bio-reactor with uniform perfusion flow. This is achieved by introducing a specific type of…

Fluid Dynamics · Physics 2009-05-20 Fridolin Okkels , Martin Dufva , Henrik Bruus

There have been multiple methods proposed to calculate lift coefficients in microfluidic channels. One of the most used methods is using Direct Numerical Simulation. DNS is a very accurate yet computationally expensive method. DNS…

Fluid Dynamics · Physics 2022-10-24 Erfan Hamdi , Rasool Dezhkam , Amir Shamloo , Ali Mashhadian

Colloidal lithography has emerged as a promising alternative to conventional nanofabrication techniques, offering the ability to create nanoscale patterns in a cost-effective and scalable manner. However, it has been so far limited by…

We report on a microfluidic method that allows measurement of a small concentration of large contaminants in suspensions of solid micrometer-scale particles. To perform the measurement, we flow the colloidal suspension through a series of…

We reveal an unreported physical mechanism that enables the pre-concentration, sorting and characterization of charged polystyrene nanobeads and liposomes dispersed in a continuous flow within a straight micron-sized channel. Initially, a…

Microscopes are essential for biomechanics and hydrodynamical investigation of small aquatic organisms. We report a DIY microscope (GLUBscope) that enables the visualization of organisms from two orthogonal imaging planes (top and side…

Quantitative Methods · Quantitative Biology 2023-07-26 Brian T. Le , Katherine M. Auer , David A. Lopez , Justin P. Shum , Brian Suarsana , Ga-Young Kelly Suh , Per Niklas Hedde , Siavash Ahrar

Richard A. Mathies is professor emeritus of Chemistry at the University of California, Berkeley. In this contribution he summarizes his journey through microfluidics over the past 30 years from the invention of Capillary Array…

Fluid Dynamics · Physics 2018-02-16 Richard Mathies

Molecular Communications (MC), transferring information via chemical signals, holds promise for transformative healthcare applications within the Internet of Bio-Nano Things (IoBNT) framework. Despite promising advances toward practical MC…

Emerging Technologies · Computer Science 2025-02-03 Maide Miray Albay , Eren Akyol , Fariborz Mirlou , Levent Beker , Murat Kuscu

The movement of ionic solutions is an essential part of biology and technology. Fluidics, from nano- to micro- to microfluidics, is a burgeoning area of technology which is all about the movement of ionic solutions, on various scales. Many…

Quantitative Methods · Quantitative Biology 2018-06-08 Shixin Xu , Bob Eisenberg , Zilong Song , Huaxiong Huang

The transport and manipulation of particles and cells in microfluidic devices has become a core methodology in domains ranging from molecular biology to manufacturing and drug design. The rational design and operation of such devices can…

Computational Engineering, Finance, and Science · Computer Science 2020-07-15 Dmitry Alexeev , Lucas Amoudruz , Sergey Litvinov , Petros Koumoutsakos

In medical imaging, developing generalized segmentation models that can handle multiple organs and lesions is crucial. However, the scarcity of fully annotated datasets and strict privacy regulations present significant barriers to data…

Computer Vision and Pattern Recognition · Computer Science 2025-10-29 Pochuan Wang , Chen Shen , Masahiro Oda , Chiou-Shann Fuh , Kensaku Mori , Weichung Wang , Holger R. Roth

Our growing ability to tailor healthcare to the needs of individuals has the potential to transform clinical treatment. However, the measurement of multiple biomarkers to inform clinical decisions requires rapid, effective, and affordable…

Inertial microfluidics is a promising tool for many lab-on-a-chip applications. Particles in channel flows with Reynolds numbers above one undergo cross-streamline migration to a discrete set of equilibrium positions in square and…

Fluid Dynamics · Physics 2014-02-04 Christopher Prohm , Holger Stark

Abstract: In our paper the new algorithm enhanced multi gradient Dilution Preparation (EMDP) is discussed. This new algorithm is reported with a lab on chip or digital Microfluidic biochip to operate multiple operation on a tiny chip. We…

Emerging Technologies · Computer Science 2021-10-04 Meenakshi Sanyal , Somenath Chakraborty

As liquid xenon time projection chambers scale to ever-larger sizes, so too do the engineering challenges they pose. We describe a large, flexible, multipurpose test facility capable of supporting the development of a number of key aspects…

Instrumentation and Detectors · Physics 2025-11-14 Evan Angelico , Jacopo Dalmasson , Ralph DeVoe , Giorgio Gratta , Clarke A. Hardy , Brian Lenardo , Lin Si , Marie Vidal , Shuoxing Wu

Micro/nanoporous membranes have been used extensively in biological and medical applications associated with filtration, particle sorting, cell separation, and real-time sensing. Expanding its applications to microfluidics offers several…

We introduce Mediffusion -- a new method for semi-supervised learning with explainable classification based on a joint diffusion model. The medical imaging domain faces unique challenges due to scarce data labelling -- insufficient for…

Computer Vision and Pattern Recognition · Computer Science 2024-11-15 Joanna Kaleta , Paweł Skierś , Jan Dubiński , Przemysław Korzeniowski , Kamil Deja

Operando/in-situ liquid cell transmission electron microscopy (LCTEM) allows for real time imaging of dynamic nanoscale liquid-based processes. However, due to the thick liquid cell of traditional LCTEM holders and thus scattering of the…