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Objective: Hydrocephalus is a medical condition in which there is an abnormal accumulation of cerebrospinal fluid (CSF) in the brain. Segmentation of brain imagery into brain tissue and CSF (before and after surgery, i.e. pre-op vs. postop)…

Image and Video Processing · Electrical Eng. & Systems 2018-09-11 Venkateswararao Cherukuri , Peter Ssenyonga , Benjamin C. Warf , Abhaya V. Kulkarni , Vishal Monga , Steven J. Schiff

Convolutional Neural Networks (CNNs) have recently been shown to excel at performing visual place recognition under changing appearance and viewpoint. Previously, place recognition has been improved by intelligently selecting relevant…

Robotics · Computer Science 2018-10-31 Stephen Hausler , Adam Jacobson , Michael Milford

Automated surface segmentation is important and challenging in many medical image analysis applications. Recent deep learning based methods have been developed for various object segmentation tasks. Most of them are a classification based…

Computer Vision and Pattern Recognition · Computer Science 2019-09-25 Leixin Zhou , Zisha Zhong , Abhay Shah , Bensheng Qiu , John Buatti , Xiaodong Wu

We present a structured matrix factorization approach to analyzing calcium imaging recordings of large neuronal ensembles. Our goal is to simultaneously identify the locations of the neurons, demix spatially overlapping components, and…

Neurons and Cognition · Quantitative Biology 2014-09-11 Eftychios A. Pnevmatikakis , Yuanjun Gao , Daniel Soudry , David Pfau , Clay Lacefield , Kira Poskanzer , Randy Bruno , Rafael Yuste , Liam Paninski

Network pruning is widely used to lighten and accelerate neural network models. Structured network pruning discards the whole neuron or filter, leading to accuracy loss. In this work, we propose a novel concept of neuron merging applicable…

Computer Vision and Pattern Recognition · Computer Science 2020-10-27 Woojeong Kim , Suhyun Kim , Mincheol Park , Geonseok Jeon

We study the problem of shape generation in 3D mesh representation from a small number of color images with or without camera poses. While many previous works learn to hallucinate the shape directly from priors, we adopt to further improve…

Computer Vision and Pattern Recognition · Computer Science 2022-04-22 Chao Wen , Yinda Zhang , Chenjie Cao , Zhuwen Li , Xiangyang Xue , Yanwei Fu

The main contribution of this paper is to propose an iterative procedure for tubular structure segmentation of 2D images, which combines tight frame of Curvelet transforms with a SURE technique thresholding which is based on principle…

Computer Vision and Pattern Recognition · Computer Science 2025-06-10 Nasser Aghazadeh , Ladan Sharafyan Cigaroudy

Spectral graph theory is well known and widely used in computer vision. In this paper, we analyze image segmentation algorithms that are based on spectral graph theory, e.g., normalized cut, and show that there is a natural connection…

Computer Vision and Pattern Recognition · Computer Science 2016-11-09 Chengxi Ye , Yuxu Lin , Mingli Song , Chun Chen , David W. Jacobs

It is known that humans display "shape bias" when classifying new items, i.e., they prefer to categorize objects based on their shape rather than color. Convolutional Neural Networks (CNNs) are also designed to take into account the spatial…

Computer Vision and Pattern Recognition · Computer Science 2018-03-22 Hossein Hosseini , Baicen Xiao , Mayoore Jaiswal , Radha Poovendran

In this work we discuss the known algorithms for linear colour segmentation based on a physical approach and propose a new modification of segmentation algorithm. This algorithm is based on a region adjacency graph framework without a…

Computer Vision and Pattern Recognition · Computer Science 2019-03-26 Anna Smagina , Valentina Bozhkova , Sergey Gladilin , Dmitry Nikolaev

We transpose an optimal control technique to the image segmentation problem. The idea is to consider image segmentation as a parameter estimation problem. The parameter to estimate is the color of the pixels of the image. We use the…

Numerical Analysis · Mathematics 2011-05-24 Hend Ben Ameur , Guy Chavent , Francois Clément , Pierre Weis

Calcium imaging for observing spiking activity from large populations of neurons are quickly gaining popularity. While the raw data are fluorescence movies, the underlying spike trains are of interest. This work presents a fast non-negative…

Quantitative Methods · Quantitative Biology 2011-02-21 Joshua T. Vogelstein , Adam M. Packer , Tim A. Machado , Tanya Sippy , Baktash Babadi , Rafael Yuste , Liam Paninski

Recent experiments in computer vision demonstrate texture bias as the primary reason for supreme results in models employing Convolutional Neural Networks (CNNs), conflicting with early works claiming that these networks identify objects…

Computer Vision and Pattern Recognition · Computer Science 2023-08-29 Satyam Mohla , Anshul Nasery , Biplab Banerjee

We represent 3D shape by structured 2D representations of fixed length making it feasible to apply well investigated 2D convolutional neural networks (CNN) for both discriminative and geometric tasks on 3D shapes. We first provide a general…

Computer Vision and Pattern Recognition · Computer Science 2023-08-14 Kripasindhu Sarkar , Elizabeth Mathews , Didier Stricker

For representing articulated shapes, as an alternative to the structured models based on graphs representing part hierarchy, we propose a pixel-based distinctness measure. Its spatial distribution yields a partitioning of the shape into a…

Computer Vision and Pattern Recognition · Computer Science 2018-07-31 Asli Genctav , Sibel Tari

We demonstrate an object tracking method for 3D images with fixed computational cost and state-of-the-art performance. Previous methods predicted transformation parameters from convolutional layers. We instead propose an architecture that…

Computer Vision and Pattern Recognition · Computer Science 2021-09-28 Daniel Moyer , Esra Abaci Turk , P Ellen Grant , William M. Wells , Polina Golland

Vessel segmentation is widely used to help with vascular disease diagnosis. Vessels reconstructed using existing methods are often not sufficiently accurate to meet clinical use standards. This is because 3D vessel structures are highly…

Image and Video Processing · Electrical Eng. & Systems 2023-01-09 Gangming Zhao , Kongming Liang , Chengwei Pan , Fandong Zhang , Xianpeng Wu , Xinyang Hu , Yizhou Yu

Delineating the associations between images and a vector of covariates is of central interest in medical imaging studies. To tackle this problem of image response regression, we propose a novel nonparametric approach in the framework of…

Machine Learning · Statistics 2022-03-04 Daiwei Zhang , Lexin Li , Chandra Sripada , Jian Kang

We present a deep learning method that propagates point-wise feature representations across shapes within a collection for the purpose of 3D shape segmentation. We propose a cross-shape attention mechanism to enable interactions between a…

Computer Vision and Pattern Recognition · Computer Science 2023-07-06 Marios Loizou , Siddhant Garg , Dmitry Petrov , Melinos Averkiou , Evangelos Kalogerakis

Existing approaches for classifying dynamic graphs either lift graph kernels to the temporal domain, or use graph neural networks (GNNs). However, current baselines have scalability issues, cannot handle a changing node set, or do not take…

Machine Learning · Computer Science 2023-10-24 Franz Srambical , Bastian Rieck