Related papers: Hamiltonian dynamics and distributed chaos in DNA
Sexual reproduction presents significant challenges to formal treatment of evolutionary processes. A starting point for systematic treatments of ecological and evolutionary phenomena has been provided by the gene centered view of evolution…
The twisting deformation of mechanically stretched DNA molecules is studied by a coarse grained Hamiltonian model incorporating the fundamental interactions that stabilize the double helix and accounting for the radial and angular base pair…
We observe deterministic chaos in a simple network of electronic logic gates that are not regulated by a clocking signal. The resulting power spectrum is ultra-wide-band, extending from dc to beyond 2 GHz. The observed behavior is…
Characterizing the emergence of chaotic dynamics of complex networks is an essential task in nonlinear science with potential important applications in many fields such as neural control engineering, microgrid technologies, and ecological…
We compare asynchronous vs. synchronous update of discrete dynamical networks and find that a simple time delay in the nodes may induce a reproducible deterministic dynamics even in the case of asynchronous update in random order. In…
Collective behavior is studied in globally coupled maps with distributed nonlinearity. It is shown that the heterogeneity enhances regularity in the collective dynamics. Low-dimensional quasiperiodic motion is often found for the…
Classical Hamiltonian systems with conserved charges and those with constraints often describe dynamics on a pre-symplectic manifold. Here we show that a pre-symplectic manifold is also the proper stage to describe autonomous energy…
The Hamiltonian formalism plays a central role in classical and quantum physics. Hamiltonians are the main tool for modelling the continuous time evolution of systems with conserved quantities, and they come equipped with many useful…
The problem of diagonalization of Hamiltonians of N-dimensional boson systems by means of time-dependent canonical transformations (CT) is considered, the case of quadratic Hamiltonians being treated in greater detail. The unitary generator…
Natural populations often show enhanced genetic drift consistent with a strong skew in their offspring number distribution. The skew arises because the variability of family sizes is either inherently strong or amplified by population…
We prove the presence of topological chaos at high internal energies for a new class of mechanical refraction billiards coming from Celestial Mechanics. Given a smooth closed domain $D\in\mathbb{R}^2$, a central mass generates a Keplerian…
This topical review focusses on the contributions of plasma physics to chaos and nonlinear dynamics bringing new methods which are or can be used in other scientific domains. It starts with the development of the theory of Hamiltonian…
Small networks of chaotic units which are coupled by their time-delayed variables, are investigated. In spite of the time delay, the units can synchronize isochronally, i.e. without time shift. Moreover, networks can not only synchronize…
We investigate the spectral structure of reset-driven Floquet quantum channels generated by the Hamiltonian evolution of a many-body system followed by periodic resetting of a bath. By tuning a chaos-controlling parameter in the underlying…
Chaos transition, as an important topic, has become an active research subject in non-linear science. By considering a Dicke Hamiltonian coupled to a bath of harmonic oscillator, we have been able to introduce a logistic map with quantum…
The possibility of complicated dynamic behaviour driven by non-linear feedbacks in dynamical systems has revolutionized science in the latter part of the last century. Yet despite examples of complicated frequency dynamics, the possibility…
Randomization of the Lagrangian chaos in fluid dynamics has been analyzed using results of direct numerical simulations, laboratory measurements, and oceanic observations. The notion of distributed chaos has been used in order to quantify…
The Hamiltonian of an isolated quantum mechanical system determines its dynamics and physical behaviour. This study investigates the possibility of learning and utilising a system's Hamiltonian and its variational thermal state estimation…
Chaos is generic in strongly-coupled recurrent networks of model neurons, and thought to be an easily accessible dynamical regime in the brain. While neural chaos is typically seen as an impediment to robust computation, we show how such…
We propose random non-Hermitian Hamiltonians to model the generic stochastic nonlinear dynamics of a quantum state in Hilbert space. Our approach features an underlying linearity in the dynamical equations, ensuring the applicability of…