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Bayesian networks provide a powerful tool for reasoning about probabilistic causation, used in many areas of science. They are, however, intrinsically classical. In particular, Bayesian networks naturally yield the Bell inequalities.…

Quantum Physics · Physics 2014-12-03 Joe Henson , Raymond Lal , Matthew F. Pusey

Directed acyclic graphical models (DAGs) are often used to describe common structural properties in a family of probability distributions. This paper addresses the question of classifying DAGs up to an isomorphism. By considering Gaussian…

Information Theory · Computer Science 2014-12-24 Hajir Roozbehani , Yury Polyanskiy

We propose Partition Tree, a novel tree-based framework for conditional density estimation over general outcome spaces that supports both continuous and categorical variables within a unified formulation. Our approach models conditional…

Machine Learning · Computer Science 2026-05-13 Felipe Angelim , Alessandro Leite

The recursive and hierarchical structure of full rooted trees is applicable to represent statistical models in various areas, such as data compression, image processing, and machine learning. In most of these cases, the full rooted tree is…

Machine Learning · Statistics 2022-03-24 Yuta Nakahara , Shota Saito , Akira Kamatsuka , Toshiyasu Matsushima

We investigate the algebra and geometry of general interventions in discrete DAG models. To this end, we introduce a theory for modeling soft interventions in the more general family of staged tree models and develop the formalism to study…

Statistics Theory · Mathematics 2023-10-18 Eliana Duarte , Liam Solus

Theory of graphical models has matured over more than three decades to provide the backbone for several classes of models that are used in a myriad of applications such as genetic mapping of diseases, credit risk evaluation, reliability and…

Machine Learning · Statistics 2014-11-13 Henrik Nyman , Johan Pensar , Timo Koski , Jukka Corander

A new family of tree models is proposed, which we call "differential trees." A differential tree model is constructed from multiple data sets and aims to detect distributional differences between them. The new methodology differs from the…

Methodology · Statistics 2012-10-01 Yong Wang , Ilze Ziedins , Mark Holmes , Neil Challands

This work considers the problem of learning the structure of multivariate linear tree models, which include a variety of directed tree graphical models with continuous, discrete, and mixed latent variables such as linear-Gaussian models,…

Machine Learning · Computer Science 2011-11-09 Animashree Anandkumar , Kamalika Chaudhuri , Daniel Hsu , Sham M. Kakade , Le Song , Tong Zhang

We consider the inference of the structure of an undirected graphical model in an exact Bayesian framework. More specifically we aim at achieving the inference with close-form posteriors, avoiding any sampling step. This task would be…

Machine Learning · Statistics 2017-05-02 Loïc Schwaller , Stéphane Robin , Michael Stumpf

This article considers some affine algebraic varieties attached to finite trees and closely related to cluster algebras. Their definition involves a canonical coloring of vertices of trees into three colors. These varieties are proved to be…

Quantum Algebra · Mathematics 2014-03-04 Frédéric Chapoton

Generative models for graphs have been typically committed to strong prior assumptions concerning the form of the modeled distributions. Moreover, the vast majority of currently available models are either only suitable for characterizing…

Social and Information Networks · Computer Science 2012-10-19 Antonino Freno , Mikaela Keller , Gemma C. Garriga , Marc Tommasi

One of the most important concepts in biological network analysis is that of network motifs, which are patterns of interconnections that occur in a given network at a frequency higher than expected in a random network. In this work we are…

Discrete Mathematics · Computer Science 2020-05-29 Diego P Rubert , Eloi Araujo , Marco A Stefanes , Jens Stoye , Fábio V Martinez

Probabilistic inferences distill knowledge from graphs to aid human make important decisions. Due to the inherent uncertainty in the model and the complexity of the knowledge, it is desirable to help the end-users understand the inference…

Social and Information Networks · Computer Science 2019-08-21 Chao Chen , Yifei Liu , Xi Zhang , Sihong Xie

The comprehensive characterization of the structure of complex networks is essential to understand the dynamical processes which guide their evolution. The discovery of the scale-free distribution and the small world property of real…

Computational Physics · Physics 2009-11-13 Paulino R. Villas Boas , Francisco A. Rodrigues , Gonzalo Travieso , Luciano da F. Costa

Invariants are a set of properties over program attributes that are expected to be true during the execution of a program. Since developing those invariants manually can be costly and challenging, there are a myriad of approaches that…

Robotics · Computer Science 2020-12-15 Meriel Stein , Sebastian Elbaum , Lu Feng , Shili Sheng

We introduce equivariant tree models in algebraic statistics, which unify and generalise existing tree models such as the general Markov model, the strand symmetric model, and group based models. We focus on the ideals of such models. We…

Algebraic Geometry · Mathematics 2017-10-10 Jan Draisma , Jochen Kuttler

The occurrence and the distribution of patterns of trees associated to natural numbers are investigated. Bounds from above and below are proven for certain natural quantities.

Number Theory · Mathematics 2024-01-09 Roberto Conti , Pierluigi Contucci , Vitalii Iudelevich

Latent tree models are graphical models defined on trees, in which only a subset of variables is observed. They were first discussed by Judea Pearl as tree-decomposable distributions to generalise star-decomposable distributions such as the…

Statistics Theory · Mathematics 2017-08-03 Piotr Zwiernik

An empirical model is a generalization of a probability space. It consists of a simplicial complex of subsets of a class X of random variables such that each simplex has an associated probability distribution. The ensuing marginalizations…

Quantum Physics · Physics 2020-07-01 Rodrigo Iglesias , Fernando Tohmé , Marcelo Auday

We study the fundamental question of how likely it is that two randomly chosen trees are isomorphic to each other for different models of random trees. We show that the probability decays exponentially for rooted labeled trees as well as…

Probability · Mathematics 2023-04-11 Christoffer Olsson