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Related papers: Biomedical term normalization of EHRs with UMLS

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Citation analysis of documents retrieved from the Medline database (at the Web of Knowledge) has been possible only on a case-by-case basis. A technique is here developed for citation analysis in batch mode using both Medical Subject…

Digital Libraries · Computer Science 2012-07-03 Loet Leydesdorff , Tobias Opthof

Automated text simplification aims to produce simple versions of complex texts. This task is especially useful in the medical domain, where the latest medical findings are typically communicated via complex and technical articles. This…

Computation and Language · Computer Science 2023-10-19 Sebastian Joseph , Kathryn Kazanas , Keziah Reina , Vishnesh J. Ramanathan , Wei Xu , Byron C. Wallace , Junyi Jessy Li

Robust machine learning relies on access to data that can be used with standardized frameworks in important tasks and the ability to develop models whose performance can be reasonably reproduced. In machine learning for healthcare, the…

Previous work on clinical relation extraction from free-text sentences leveraged information about semantic types from clinical knowledge bases as a part of entity representations. In this paper, we exploit additional evidence by also…

Computation and Language · Computer Science 2025-03-10 Linh Le , Guido Zuccon , Gianluca Demartini , Genghong Zhao , Xia Zhang

Nowadays the medical domain is receiving more and more attention in applications involving Artificial Intelligence as clinicians decision-making is increasingly dependent on dealing with enormous amounts of unstructured textual data. In…

Computation and Language · Computer Science 2024-07-25 Anar Yeginbergen , Rodrigo Agerri

Electronic health records (EHR) offer unprecedented opportunities for in-depth clinical phenotyping and prediction of clinical outcomes. Combining multiple data sources is crucial to generate a complete picture of disease prevalence,…

Computation and Language · Computer Science 2022-12-01 Anna Munoz-Farre , Harry Rose , Sera Aylin Cakiroglu

The increasing complexity of clinical decision-making, alongside the rapid expansion of electronic health records (EHR), presents both opportunities and challenges for delivering data-informed care. This paper proposes a clinical decision…

Artificial Intelligence · Computer Science 2025-10-03 Leon Garza , Anantaa Kotal , Michael A. Grasso , Emre Umucu

The COVID-19 pandemic has put immense pressure on health systems which are further strained due to the misinformation surrounding it. Under such a situation, providing the right information at the right time is crucial. There is a growing…

Computation and Language · Computer Science 2020-11-02 Ridam Pal , Rohan Pandey , Vaibhav Gautam , Kanav Bhagat , Tavpritesh Sethi

Accurate clinical prognosis requires synthesizing structured Electronic Health Records (EHRs) with real-time physiological signals like the Electrocardiogram (ECG). Large Language Models (LLMs) offer a powerful reasoning engine for this…

Machine Learning · Computer Science 2026-01-27 Jialu Tang , Tong Xia , Yuan Lu , Aaqib Saeed

Electronic health records (EHRs), digital collections of patient healthcare events and observations, are ubiquitous in medicine and critical to healthcare delivery, operations, and research. Despite this central role, EHRs are notoriously…

Electronic health records (EHRs), which contain patients' medical histories, tend to be written in freely formatted (unstructured) text because they are complicated by their nature. Quickly understanding a patient's history is challenging…

Human-Computer Interaction · Computer Science 2023-06-27 Shuntaro Yada , Eiji Aramaki

The Bavarian Academy of Sciences and Humanities aims to digitize its Medieval Latin Dictionary. This dictionary entails record cards referring to lemmas in medieval Latin, a low-resource language. A crucial step of the digitization process…

Computer Vision and Pattern Recognition · Computer Science 2023-08-21 Philipp Koch , Gilary Vera Nuñez , Esteban Garces Arias , Christian Heumann , Matthias Schöffel , Alexander Häberlin , Matthias Aßenmacher

The rapid advancement of large language models (LLMs) has opened new boundaries in the extraction and synthesis of medical knowledge, particularly within evidence synthesis. This paper reviews the state-of-the-art applications of LLMs in…

In the field of biomedical natural language processing, medical concept normalization is a crucial task for accurately mapping mentions of concepts to a large knowledge base. However, this task becomes even more challenging in low-resource…

Computation and Language · Computer Science 2024-09-24 Tim Patzelt

One of the critical issues contributing to inefficiency in Puskesmas (Indonesian community health centers) is the time-consuming nature of documenting doctor-patient interactions. Doctors must conduct thorough consultations and manually…

Artificial Intelligence · Computer Science 2025-08-26 Nur Ahmad Khatim , Azmul Asmar Irfan , Mansur M. Arief

Health literacy is the central focus of Healthy People 2030, the fifth iteration of the U.S. national goals and objectives. People with low health literacy usually have trouble understanding health information, following post-visit…

Computation and Language · Computer Science 2022-09-15 David Oniani , Sreekanth Sreekumar , Renuk DeAlmeida , Dinuk DeAlmeida , Vivian Hui , Young Ji Lee , Yiye Zhang , Leming Zhou , Yanshan Wang

In the rapidly evolving field of healthcare and beyond, the integration of generative AI in Electronic Health Records (EHRs) represents a pivotal advancement, addressing a critical gap in current information extraction techniques. This…

Computation and Language · Computer Science 2024-06-03 Mohammed-Khalil Ghali , Abdelrahman Farrag , Hajar Sakai , Hicham El Baz , Yu Jin , Sarah Lam

The practice of evidence-based medicine (EBM) urges medical practitioners to utilise the latest research evidence when making clinical decisions. Because of the massive and growing volume of published research on various medical topics,…

Computation and Language · Computer Science 2017-06-27 Abeed Sarker , Diego Molla , Cecile Paris

We introduce an explainability method for biomedical hypothesis generation systems, built on top of the novel Hypothesis Generation Context Retriever framework. Our approach combines semantic graph-based retrieval and relevant…

Information Retrieval · Computer Science 2025-11-11 Ilya Tyagin , Saeideh Valipour , Aliaksandra Sikirzhytskaya , Michael Shtutman , Ilya Safro

The utilization of clinical reports for various secondary purposes, including health research and treatment monitoring, is crucial for enhancing patient care. Natural Language Processing (NLP) tools have emerged as valuable assets for…

Computation and Language · Computer Science 2023-06-14 Iker de la Iglesia , Aitziber Atutxa , Koldo Gojenola , Ander Barrena