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We study self-regulating processes modeling biological transportation networks. Firstly, we write the formal $L^2$-gradient flow for the symmetric tensor valued diffusivity $D$ of a broad class of entropy dissipations associated with a…

Analysis of PDEs · Mathematics 2024-03-14 Jan Haskovec , Peter Markowich , Simone Portaro

In this article we present a system of coupled non-linear PDEs modeling an anisotropic electrokinetic flow. We show the existence of suitable weak solutions in three spatial dimensions, that is weak solutions which fulfill an energy…

Analysis of PDEs · Mathematics 2024-07-30 Dietmar Hömberg , Robert Lasarzik , Luisa Plato

In studies of the brain and the nervous system, extracellular signals - as measured by local field potentials (LFPs) or electroencephalography (EEG) - are of capital importance, as they allow to simultaneously obtain data from multiple…

Neurons and Cognition · Quantitative Biology 2019-06-10 Jurgis Pods

We develop, and implement in a Finite Volume environment, a density-based approach for the Euler equations written in conservative form using density, momentum, and total energy as variables. Under simplifying assumptions, these equations…

Numerical Analysis · Mathematics 2024-05-01 Nicola Clinco , Michele Girfoglio , Annalisa Quaini , Gianluigi Rozza

Investigating blood flow in the cardiovascular system is crucial for assessing cardiovascular health. Computational approaches offer some non-invasive alternatives to measure blood flow dynamics. Numerical simulations based on traditional…

Numerical Analysis · Mathematics 2024-06-07 Han Zhang , Raymond Chan , Xue-Cheng Tai

In the present study, two schemes named face discernment and flux correction are proposed to achieve single-phase transportation of free charge in multiphase electrohydrodynamic(EHD) problems. Many EHD phenomena occur between air and…

Fluid Dynamics · Physics 2022-07-19 Qiang Liu , Jie Zhang , Jian Wu

Flow Models based on hyperbolic partial differential equations (conservation laws) are a well-established approach for the material flow simulation. Until now, they have been exclusively used for the simulation of cylindrical cargo. This…

Numerical Analysis · Mathematics 2024-12-20 Domenik Prims , Jennifer Kötz , Simone Göttlich , André Katterfeld

A general 3D flow-and-transport model in porous media is derived using an axiomatic continuum-mechanics approach and implemented with the finite element method to simulate microbial enhanced oil recovery (MEOR) at core scale under…

This technical report documents the theoretical, computational, and practical aspects of the one-dimensional Navier-Stokes finite element flow model. The document is particularly useful to those who are interested in implementing,…

Fluid Dynamics · Physics 2013-04-09 Taha Sochi

We have developed efficient numerical algorithms for solving 3D steady-state Poisson-Nernst-Planck (PNP) equations with excess chemical potentials described by the classical density functional theory (cDFT). The coupled PNP equations are…

Numerical Analysis · Mathematics 2016-08-24 Da Meng , Bin Zheng , Guang Lin , Maria L. Sushko

This work concerns the simulation of compressible multi-material fluid flows and follows the method FVCF-NIP described in the former paper Braeunig et al (Eur. J. Mech. B/Fluids, 2009). This Cell-centered Finite Volume method is totally…

Numerical Analysis · Mathematics 2010-10-26 Raphaël Loubère , Jean-Philippe Braeunig , Jean-Michel Ghidaglia

Physical parameters characterising electrokinetic transport in a confined electrolyte solution are reconstructed from the generic transport coefficients obtained within the classical non-equilibrium statistical thermodynamic framework. The…

Soft Condensed Matter · Physics 2014-11-18 Hiroaki Yoshida , Hideyuki Mizuno , Tomoyuki Kinjo , Hitoshi Washizu , Jean-Louis Barrat

Electrokinetic transport phenomena can strongly influence the behaviour of macromolecules and colloidal particles in solution, with applications in, e.g., DNA translocation through nanopores, electro-osmotic flow in nanocapillaries, and…

Soft Condensed Matter · Physics 2016-08-03 Georg Rempfer , Gary B. Davies , Christian Holm , Joost de Graaf

A finite element discretization using a method of lines approached is proposed for approximately solving the Poisson-Nernst-Planck (PNP) equations. This discretization scheme enforces positivity of the computed solutions, corresponding to…

Numerical Analysis · Mathematics 2015-03-17 Chun Liu , Maximilian Metti , Jinchao Xu

Numerical simulation of compressible fluid flows is performed using the Euler equations. They include the scalar advection equation for the density, the vector advection equation for the velocity and a given pressure dependence on the…

Computational Engineering, Finance, and Science · Computer Science 2018-01-22 Petr N. Vabishchevich

Theoretically and experimentally, we study electroviscous phenomena resulting from charge-flow coupling in a nanoscale capillary. Our theoretical approach relies on Poisson-Boltzmann mean-field theory and on coupled linear relations for…

In this paper we present a finite element method (FEM) for two-phase incompressible flows with moving contact lines. We use a sharp interface Navier-Stokes model for the bulk phase fluid dynamics. Surface tension forces, including Marangoni…

Fluid Dynamics · Physics 2015-10-13 A. Reusken , X. Xu , L. Zhang

We introduce GEA (Geophysical and Environmental Applications), a new open-source atmosphere and ocean modeling framework within the finite volume C++ library OpenFOAM. Here, we present the development of a non-hydrostatic atmospheric model…

Fluid Dynamics · Physics 2023-03-21 Michele Girfoglio , Annalisa Quaini , Gianluigi Rozza

In this paper, our aim is to present (1) an embedded fracture model (EFM) for coupled flow and mechanics problem based on the dual continuum approach on the fine grid and (2) an upscaled model for the resulting fine grid equations. The…

Numerical Analysis · Mathematics 2018-11-14 Maria Vasilyeva , Eric T. Chung , Yalchin Efendiev , Jihoon Kim

In order to describe the dynamics of crowded ions (charged particles), we use an energetic variation approach to derive a modified Poisson-Nernst-Planck (PNP) system which includes an extra dissipation due to the effective velocity…

Mathematical Physics · Physics 2014-08-01 Chia-Yu Hsieh , YunKyong Hyon , Hijin Lee , Tai-Chia Lin , Chun Liu