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Examining locomotion has improved our basic understanding of motor control and aided in treating motor impairment. Mice and rats are premier models of human disease and increasingly the model systems of choice for basic neuroscience. High…

Computer Vision and Pattern Recognition · Computer Science 2017-11-27 Omid Haji Maghsoudi , Andrew Spence

Examining locomotion has improved our basic understanding of motor control and aided in treating motor impairment. Mice and rats are the model system of choice for basic neuroscience studies of human disease. High frame rates are needed to…

Computer Vision and Pattern Recognition · Computer Science 2018-09-05 Omid Haji Maghsoudi , Annie Vahedipour , Benjamin Robertson , Andrew Spence

Examining locomotion has improved our basic understanding of motor control and aided in treating motor impairment. Mice and rats are premier models of human disease and increasingly the model systems of choice for basic neuroscience. High…

Computer Vision and Pattern Recognition · Computer Science 2018-05-29 Omid Haji Maghsoudi , Annie Vahedipour Tabrizi , Benjamin Robertson , Andrew Spence

Quantifying behavior is crucial for many applications in neuroscience. Videography provides easy methods for the observation and recording of animal behavior in diverse settings, yet extracting particular aspects of a behavior for further…

Computer Vision and Pattern Recognition · Computer Science 2018-08-24 Alexander Mathis , Pranav Mamidanna , Taiga Abe , Kevin M. Cury , Venkatesh N. Murthy , Mackenzie W. Mathis , Matthias Bethge

We focus on the challenging problem of efficient mouse 3D pose estimation based on static images, and especially single depth images. We introduce an approach to discriminatively train the split nodes of trees in random forest to improve…

Computer Vision and Pattern Recognition · Computer Science 2015-11-25 Ashwin Nanjappa , Li Cheng , Wei Gao , Chi Xu , Adam Claridge-Chang , Zoe Bichler

Animals have evolved highly functional visual systems to understand motion, assisting perception even under complex environments. In this paper, we work towards developing a computer vision system able to segment objects by exploiting…

Computer Vision and Pattern Recognition · Computer Science 2021-08-12 Charig Yang , Hala Lamdouar , Erika Lu , Andrew Zisserman , Weidi Xie

Our objective is to locate and provide a unique identifier for each mouse in a cluttered home-cage environment through time, as a precursor to automated behaviour recognition for biological research. This is a very challenging problem due…

Computer Vision and Pattern Recognition · Computer Science 2023-07-20 Michael P. J. Camilleri , Li Zhang , Rasneer S. Bains , Andrew Zisserman , Christopher K. I. Williams

Recognition of individual components and keypoint detection supported by instance segmentation is crucial to analyze the behavior of agents on the scene. Such systems could be used for surveillance, self-driving cars, and also for medical…

Computer Vision and Pattern Recognition · Computer Science 2024-05-09 László Kopácsi , Áron Fóthi , András Lőrincz

The study of mouse social behaviours has been increasingly undertaken in neuroscience research. However, automated quantification of mouse behaviours from the videos of interacting mice is still a challenging problem, where object tracking…

Computer Vision and Pattern Recognition · Computer Science 2022-03-28 Zheheng Jiang , Zhihua Liu , Long Chen , Lei Tong , Xiangrong Zhang , Xiangyuan Lan , Danny Crookes , Ming-Hsuan Yang , Huiyu Zhou

We introduce a novel musculoskeletal model of a dog, procedurally generated from accurate 3D muscle meshes. Accompanying this model is a motion capture-based locomotion task compatible with a variety of control algorithms, as well as an…

Robotics · Computer Science 2025-07-01 Vittorio La Barbera , Steven Bohez , Leonard Hasenclever , Yuval Tassa , John R. Hutchinson

Wireless Capsule Endoscopy (WCE) is relatively a new technology to examine the entire GI trace. During an examination, it captures more than 55,000 frames. Reviewing all these images is time-consuming and prone to human error. It has been a…

Computer Vision and Pattern Recognition · Computer Science 2017-11-20 Omid Haji Maghsoudi

Tracking mouse body parts in video is often incomplete due to occlusions such that - e.g. - subsequent action and behavior analysis is impeded. In this conceptual work, videos from several perspectives are integrated via global exterior…

Research in neuroscience and vision science relies heavily on careful measurements of animal subject's gaze direction. Rodents are the most widely studied animal subjects for such research because of their economic advantage and hardiness.…

Image and Video Processing · Electrical Eng. & Systems 2025-06-11 Isha Puri , David Cox

Semantic Segmentation combines two sub-tasks: the identification of pixel-level image masks and the application of semantic labels to those masks. Recently, so-called Foundation Models have been introduced; general models trained on very…

Computer Vision and Pattern Recognition · Computer Science 2023-10-03 David Balaban , Justin Medich , Pranay Gosar , Justin Hart

In this work, we propose a method for the classification of animal in images. Initially, a graph cut based method is used to perform segmentation in order to eliminate the background from the given image. The segmented animal images are…

Computer Vision and Pattern Recognition · Computer Science 2016-09-25 Y H Sharath Kumar , Manohar N , H K Chethan

Daily life of thousands of individuals around the globe suffers due to physical or mental disability related to limb movement. The quality of life for such individuals can be made better by use of assistive applications and systems. In such…

Signal Processing · Electrical Eng. & Systems 2022-02-02 Asad Mansoor Khan , Ayesha Sadiq , Sajid Gul Khawaja , Norah Saleh Alghamdi , Muhammad Usman Akram , Ali Saeed

Feature tracking is a fundamental problem in computer vision, with applications in many computer vision tasks, such as visual SLAM and action recognition. This paper introduces a novel multi-body feature tracker that exploits a multi-body…

Computer Vision and Pattern Recognition · Computer Science 2016-03-16 Pan Ji , Hongdong Li , Mathieu Salzmann , Yiran Zhong

The behavioural research of pigs can be greatly simplified if automatic recognition systems are used. Especially systems based on computer vision have the advantage that they allow an evaluation without affecting the normal behaviour of the…

Computer Vision and Pattern Recognition · Computer Science 2020-09-03 Johannes Brünger , Maria Gentz , Imke Traulsen , Reinhard Koch

Advances in optical neuroimaging techniques now allow neural activity to be recorded with cellular resolution in awake and behaving animals. Brain motion in these recordings pose a unique challenge. The location of individual neurons must…

Neurons and Cognition · Quantitative Biology 2017-05-22 Jeffrey P. Nguyen , Ashley N. Linder , George S. Plummer , Joshua W. Shaevitz , Andrew M. Leifer

This paper aims at developing an automatic algorithm for moth recognition from trap images in real-world conditions. This method uses our previous work for detection [1] and introduces an adapted classification step. More precisely, SVM…

Computer Vision and Pattern Recognition · Computer Science 2018-09-19 Mohamed Chafik Bakkay , Sylvie Chambon , Hatem A. Rashwan , Christian Lubat , Sébastien Barsotti
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