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In clinical practice, multi-modal magnetic resonance imaging (MRI) with different contrasts is usually acquired in a single study to assess different properties of the same region of interest in the human body. The whole acquisition process…

Image and Video Processing · Electrical Eng. & Systems 2022-04-05 Kai Xuan , Lei Xiang , Xiaoqian Huang , Lichi Zhang , Shu Liao , Dinggang Shen , Qian Wang

Many imaging problems require solving an inverse problem that is ill-conditioned or ill-posed. Imaging methods typically address this difficulty by regularising the estimation problem to make it well-posed. This often requires setting the…

Methodology · Statistics 2020-08-17 Ana F. Vidal , Valentin De Bortoli , Marcelo Pereyra , Alain Durmus

We present a foundation model for brain MRI that can work with different combinations of imaging sequences. The model uses one encoder with learnable modality embeddings, conditional layer normalization, and a masked autoencoding objective…

Computer Vision and Pattern Recognition · Computer Science 2025-11-06 Minh Sao Khue Luu , Bair N. Tuchinov

Diffusion MRI is a well established imaging modality providing a powerful way to probe the structure of the white matter non-invasively. Despite its potential, the intrinsic long scan times of these sequences have hampered their use in…

Quantitative Methods · Quantitative Biology 2013-12-31 Alessandro Daducci , Dimitri Van De Ville , Jean-Philippe Thiran , Yves Wiaux

The explorations of models beyond the Standard Model (BSM) naturally involve scans over the unknown BSM parameters. On the other hand, high precision predictions require calculations at the loop-level and thus a renormalization of (some of)…

High Energy Physics - Phenomenology · Physics 2024-07-01 S. Heinemeyer , F. von der Pahlen

We propose and investigate efficient numerical methods for inverse problems related to Magnetic Resonance Imaging (MRI). Our goal is to extend the recent convergence results for the Landweber-Kaczmarz method obtained in [Haltmeier, Leitao,…

Numerical Analysis · Mathematics 2020-12-22 A. Leitao , J. Zubelli

The problem of Bayesian filtering and smoothing in nonlinear models with additive noise is an active area of research. Classical Taylor series as well as more recent sigma-point based methods are two well-known strategies to deal with these…

Distributed, Parallel, and Cluster Computing · Computer Science 2021-02-02 Fatemeh Yaghoobi , Adrien Corenflos , Sakira Hassan , Simo Särkkä

Iterative regularization exploits the implicit bias of an optimization algorithm to regularize ill-posed problems. Constructing algorithms with such built-in regularization mechanisms is a classic challenge in inverse problems but also in…

Optimization and Control · Mathematics 2022-02-02 Cesare Molinari , Mathurin Massias , Lorenzo Rosasco , Silvia Villa

In multiband fusion, an image with a high spatial and low spectral resolution is combined with an image with a low spatial but high spectral resolution to produce a single multiband image having high spatial and spectral resolutions. This…

Image and Video Processing · Electrical Eng. & Systems 2022-10-11 Unni V. S. , Pravin Nair , Kunal N. Chaudhury

Optical molecular tomographic imaging is to reconstruct the concentration distribution of photon-molecular probes in a small animal from measured photon fluence rates. The localization and quantification of molecular probes is related to…

Biological Physics · Physics 2017-07-18 Wenxiang Cong , Xavier Intes , Ge Wang

This paper presents novel single and multi-shell sampling schemes for diffusion MRI. In diffusion MRI, it is paramount that the number of samples is as small as possible in order that scan times are practical in a clinical setting. The…

Signal Processing · Electrical Eng. & Systems 2019-02-01 Alice P. Bates , Zubair Khalid , Jason D. McEwen , Rodney A. Kennedy , Alessandro Daducci , Erick J. Canales-Rodríguez

Magnetic resonance imaging (MRI) is highly susceptible to patient motion due to its relatively long acquisition times and the fact that data are acquired sequentially in k-space. Even small patient movements introduce phase inconsistencies…

Computer Vision and Pattern Recognition · Computer Science 2026-05-22 Antonio Ortiz-Gonzalez , Erich Kobler , Lukas Schletter , Alexander Effland

The throughout knowledge of a X-ray beam spectrum is mandatory to assess the quality of its source device. Since the techniques to directly measurement such spectra are expensive and laborious, the X-ray spectrum reconstruction using…

Computational Physics · Physics 2014-11-12 Olavo Henrique Menin , Alexandre Souto Martinez , Alessandro Martins da Costa

We present a semi-sparsity model for 3D triangular mesh denoising, which is motivated by the success of semi-sparsity regularization in image processing applications. We demonstrate that such a regularization model can be also applied for…

Graphics · Computer Science 2023-05-09 Junqing Huang , Haihui Wang , Michael Ruzhansky

Low rank approximation is a commonly occurring problem in many computer vision and machine learning applications. There are two common ways of optimizing the resulting models. Either the set of matrices with a given rank can be explicitly…

Computer Vision and Pattern Recognition · Computer Science 2019-07-24 Marcus Valtonen Örnhag , Carl Olsson , Anders Heyden

X-ray tomographic reconstruction typically uses voxel basis functions to represent volumetric images. Due to the structure in voxel basis representations, efficient ray-tracing methods exist allowing fast, GPU accelerated implementations.…

Distributed, Parallel, and Cluster Computing · Computer Science 2019-08-20 Ander Biguri , Hossein Towsyfyan , Richard Boardman , Thomas Blumensath

Unsupervised registration strategies bypass requirements in ground truth transforms or segmentations by optimising similarity metrics between fixed and moved volumes. Among these methods, a recent subclass of approaches based on…

Computer Vision and Pattern Recognition · Computer Science 2025-03-10 Benjamin Billot , Ramya Muthukrishnan , Esra Abaci-Turk , P. Ellen Grant , Nicholas Ayache , Hervé Delingette , Polina Golland

Compressed Sensing MRI reconstructs images of the body's internal anatomy from undersampled measurements, thereby reducing scan time. Recently, deep learning has shown great potential for reconstructing high-fidelity images from highly…

Image and Video Processing · Electrical Eng. & Systems 2025-04-07 Armeet Singh Jatyani , Jiayun Wang , Aditi Chandrashekar , Zihui Wu , Miguel Liu-Schiaffini , Bahareh Tolooshams , Anima Anandkumar

This paper studies regularized least square recovery of signals whose samples' prior distributions are nonidentical, e.g., signals with time-variant sparsity. For this model, Bayesian framework suggests to regularize the least squares term…

Information Theory · Computer Science 2018-05-31 Ali Bereyhi , Mohammad Ali Sedaghat , Ralf R. Müller

We present a family of non-local variational regularization methods for solving tomographic problems, where the solutions are functions with range in a closed subset of the Euclidean space, for example if the solution only attains values in…

Optimization and Control · Mathematics 2019-11-18 Melanie Melching , Otmar Scherzer