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We use the concept of the network communicability (Phys. Rev. E 77 (2008) 036111) to define communities in a complex network. The communities are defined as the cliques of a communicability graph, which has the same set of nodes as the…

Physics and Society · Physics 2009-07-17 Ernesto Estrada , Naomichi Hatano

A strong clique in a graph is a clique intersecting every maximal independent set. We study the computational complexity of six algorithmic decision problems related to strong cliques in graphs and almost completely determine their…

Combinatorics · Mathematics 2018-08-28 Ademir Hujdurović , Martin Milanič , Bernard Ries

The structure of a Bayesian network encodes most of the information about the probability distribution of the data, which is uniquely identified given some general distributional assumptions. Therefore it's important to study the…

Methodology · Statistics 2014-10-15 Marco Scutari

Graph neural networks can accurately predict the chemical properties of many molecular systems, but their suitability for large, macromolecular assemblies such as gels is unknown. Here, graph neural networks were trained and optimised for…

Computational Physics · Physics 2025-04-14 D. A. Head

Since proteins carry out biological processes by interacting with other proteins, analyzing the structure of protein-protein interaction (PPI) networks could explain complex biological mechanisms, evolution, and disease. Similarly, studying…

Molecular Networks · Quantitative Biology 2010-04-22 Vesna Memisevic , Tijana Milenkovic , Natasa Przulj

Random graph null models have found widespread application in diverse research communities analyzing network datasets, including social, information, and economic networks, as well as food webs, protein-protein interactions, and neuronal…

Methodology · Statistics 2017-10-12 Bailey K. Fosdick , Daniel B. Larremore , Joel Nishimura , Johan Ugander

This paper explores a variety of strategies for understanding the formation, structure, efficiency and vulnerability of water distribution networks. Water supply systems are studied as spatially organized networks for which the practical…

Physics and Society · Physics 2011-04-04 A. Yazdani , P. Jeffrey

We provide a review and a comparison of methods for differential network estimation in Gaussian graphical models with focus on structure learning. We consider the case of two datasets from distributions associated with two graphical models.…

Methodology · Statistics 2025-03-07 Anna Plaksienko , Magne Thoresen , Vera Djordjilović

The understanding of the immense and intricate topological structure of the World Wide Web (WWW) is a major scientific and technological challenge. This has been tackled recently by characterizing the properties of its representative graphs…

Networking and Internet Architecture · Computer Science 2008-01-23 M. Angeles Serrano , Ana Maguitman , Marian Boguna , Santo Fortunato , Alessandro Vespignani

The random networks enriched with additional structures as metric and group-symmetry in background metric space are investigated. The important quantities like he clustering coefficient as well as the mean degree of separation in such…

Statistics Theory · Mathematics 2012-09-03 Michal Demetrian , Martin Nehez

We model the robustness against random failure or intentional attack of networks with arbitrary large-scale structure. We construct a block-based model which incorporates --- in a general fashion --- both connectivity and interdependence…

Physics and Society · Physics 2012-09-25 Tiago P. Peixoto , Stefan Bornholdt

Network representations of systems from various scientific and societal domains are neither completely random nor fully regular, but instead appear to contain recurring structural building blocks. These features tend to be shared by…

Social and Information Networks · Computer Science 2016-10-20 Ian Barnett , Nishant Malik , Marieke L. Kuijjer , Peter J. Mucha , Jukka-Pekka Onnela

We address the problem of distributed state estimation of a linear dynamical process in an attack-prone environment. Recent attempts to solve this problem impose stringent redundancy requirements on the measurement and communication…

Systems and Control · Electrical Eng. & Systems 2020-01-22 Aritra Mitra , Faiq Ghawash , Shreyas Sundaram , Waseem Abbas

This paper studies the problem of designing networks that are strong structurally controllable, and robust simultaneously. For given network specifications, including the number of nodes $N$, the number of leaders $N_L$, and diameter $D$,…

Systems and Control · Electrical Eng. & Systems 2023-03-13 Priyanshkumar I. Patel , Johir Suresh , Waseem Abbas

The purpose of this paper is to assess the statistical characterization of weighted networks in terms of the generalization of the relevant parameters, namely average path length, degree distribution and clustering coefficient. Although the…

Physics and Society · Physics 2007-05-23 Antoniou Ioannis , Tsompa Eleni

We conduct a comparative analysis on various estimates of the number of clusters in community detection. An exhaustive comparison requires testing of all possible combinations of frameworks, algorithms, and assessment criteria. In this…

Social and Information Networks · Computer Science 2018-03-08 Tatsuro Kawamoto , Yoshiyuki Kabashima

Understanding the structures why links are formed is an important and prominent research topic. In this paper, we therefore consider the link prediction problem in face-to-face contact networks, and analyze the predictability of new and…

Social and Information Networks · Computer Science 2014-07-09 Christoph Scholz , Martin Atzmueller , Gerd Stumme

We propose a multi-phase approach to explore network structures. In this method, structure analysis is not carried out on the observed network directly. Instead, certain similarity measures of the nodes are derived from the network firstly,…

Physics and Society · Physics 2009-07-03 Xiaofeng Gong , Shuguang Guan , C. -H. Lai

Visualization of the adjacency matrix enables us to capture macroscopic features of a network when the matrix elements are aligned properly. Community structure, a network consisting of several densely connected components, is a…

Physics and Society · Physics 2023-07-11 Masaki Ochi , Tatsuro Kawamoto

Recently, graph neural networks (GNNs) have proved to be suitable in tasks on unstructured data. Particularly in tasks as community detection, node classification, and link prediction. However, most GNN models still operate with static…

Machine Learning · Computer Science 2019-06-07 Darwin Saire Pilco , Adín Ramírez Rivera
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