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We introduce tests for the goodness of fit of point patterns via methods from topological data analysis. More precisely, the persistent Betti numbers give rise to a bivariate functional summary statistic for observed point patterns that is…

Statistics Theory · Mathematics 2019-06-19 Christophe Ange Napoléon Biscio , Nicolas Chenavier , Christian Hirsch , Anne Marie Svane

Atomic properties such as partial charges or multipoles encode chemically meaningful information that can inform downstream molecular property prediction, but their evaluation as machine learning targets has been complicated by the absence…

We apply tools from topological data analysis to two mathematical models inspired by biological aggregations such as bird flocks, fish schools, and insect swarms. Our data consists of numerical simulation output from the models of Vicsek…

Quantitative Methods · Quantitative Biology 2018-11-21 Chad M. Topaz , Lori Ziegelmeier , Tom Halverson

We present a quantum algorithm that additively approximates the value of a tensor network to a certain scale. When combined with existing results, this provides a complete problem for quantum computation. The result is a simple new way of…

Quantum Physics · Physics 2010-02-09 Itai Arad , Zeph Landau

Topological Data Analysis (TDA) has been praised by researchers for its ability to capture intricate shapes and structures within data. TDA is considered robust in handling noisy and high-dimensional datasets, and its interpretability is…

Machine Learning · Computer Science 2024-01-10 Funmilola Mary Taiwo , Umar Islambekov , Cuneyt Gurcan Akcora

Predicting and analyzing global behaviour of complex systems is challenging due to the intricate nature of their component interactions. Recent work has started modelling complex systems using networks endowed with multiway interactions…

The empirical results suggest that the learnability of a neural network is directly related to its size. To mathematically prove this, we borrow a tool in topological algebra: Betti numbers to measure the topological geometric complexity of…

Machine Learning · Computer Science 2021-11-05 Ji Yang , Lu Sang , Daniel Cremers

Segmentation algorithms are prone to make topological errors on fine-scale structures, e.g., broken connections. We propose a novel method that learns to segment with correct topology. In particular, we design a continuous-valued loss…

Computer Vision and Pattern Recognition · Computer Science 2019-06-18 Xiaoling Hu , Li Fuxin , Dimitris Samaras , Chao Chen

We implement a computational pipeline based on a recent machine learning technique, namely the Topological Data Analysis (TDA), that has the capability of extracting powerful information-carrying topological features. We apply such a method…

Strongly Correlated Electrons · Physics 2025-03-11 Andrea Tirelli , Natanael C. Costa

Topological data analysis is a relatively new branch of machine learning that excels in studying high dimensional data, and is theoretically known to be robust against noise. Meanwhile, data objects with mixed numeric and categorical…

Algebraic Topology · Mathematics 2020-06-15 Chengyuan Wu , Carol Anne Hargreaves

Topological quantum computation may provide a robust approach for encoding and manipulating information utilizing the topological properties of anyonic quasi-particle excitations. We develop an efficient means to map between dense and…

Quantum Physics · Physics 2011-08-02 Haitan Xu , J. M. Taylor

Simulating the topological phases of matter in synthetic quantum simulators is a topic of considerable interest. Given the universality of digital quantum simulators, the prospect of digitally simulating exotic topological phases is greatly…

Quantum Physics · Physics 2020-10-21 Feng Mei , Qihao Guo , Ya-Fei Yu , Liantuan Xiao , Shi-Liang Zhu , Suotang Jia

Topological data analysis (TDA) detects geometric structure in biological data. However, many TDA algorithms are memory intensive and impractical for massive datasets. Here, we introduce a statistical protocol that reduces TDA's memory…

Quantitative Methods · Quantitative Biology 2025-09-05 Andrew J. Stier , Naichen Shi , Raed Al Kontar , Chad Giusti , Marc G. Berman

In this work, we propose an efficient algorithm for the calculation of the Betti matching, which can be used as a loss function to train topology aware segmentation networks. Betti matching loss builds on techniques from topological data…

Algebraic Topology · Mathematics 2024-07-08 Nico Stucki , Vincent Bürgin , Johannes C. Paetzold , Ulrich Bauer

In this paper, we will present some ideas to use 3D topology for quantum computing. Topological quantum computing in the usual sense works with an encoding of information as knotted quantum states of topological phases of matter, thus being…

Quantum Physics · Physics 2021-02-10 Torsten Asselmeyer-Maluga

The rapid development of reliable Quantum Processing Units (QPU) opens up novel computational opportunities for machine learning. Here, we introduce a procedure for measuring the similarity between graph-structured data, based on the…

Quantum Physics · Physics 2021-09-29 Louis-Paul Henry , Slimane Thabet , Constantin Dalyac , Loïc Henriet

In recent years, topological data analysis has been utilized for a wide range of problems to deal with high dimensional noisy data. While text representations are often high dimensional and noisy, there are only a few work on the…

Machine Learning · Computer Science 2020-04-21 Shafie Gholizadeh , Armin Seyeditabari , Wlodek Zadrozny

Topological data analysis (TDA) provides a growing body of tools for computing geometric and topological information about spaces from a finite sample of points. We present a new adaptive algorithm for finding provably dense samples of…

Algebraic Topology · Mathematics 2018-10-22 Emilie Dufresne , Parker B. Edwards , Heather A. Harrington , Jonathan D. Hauenstein

Encoding and manipulation of quantum information by means of topological degrees of freedom provides a promising way to achieve natural fault-tolerance that is built-in at the physical level. We show that this topological approach to…

Quantum Physics · Physics 2009-11-07 Paolo Zanardi , Seth Lloyd

Topological data analysis (TDA) offers novel mathematical tools for deep learning. Inspired by Carlsson et al., this study designs topology-aware convolutional kernels that significantly improve speech recognition networks. Theoretically,…

Machine Learning · Computer Science 2025-05-28 Zhiwang Yu