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The present habilitation thesis in theoretical biological physics addresses two central dynamical processes in cells and organisms: (i) active motility and motility control and (ii) self-organized pattern formation. The unifying theme is…

Cell Behavior · Quantitative Biology 2018-03-21 Benjamin M. Friedrich

We investigate a system of coupled oscillators on the circle, which arises from a simple model for behavior of large numbers of autonomous vehicles. The model considers asymmetric, linear, decentralized dynamics, where the acceleration of…

Dynamical Systems · Mathematics 2014-10-08 Carlos E. Cantos , J. J. P. Veerman , David K. Hammond

We investigate the possibility that narrowband oscillations may emerge from completely asynchronous, independent neural firing. We find that a population of asynchronous neurons may produce narrowband oscillations if each neuron fires…

Neurons and Cognition · Quantitative Biology 2015-12-08 Stephen V. Gliske , Eugene Lim , Katherine A. Holman , William C. Stacey , Christian G. Fink

This paper attempts to make feasible the evolutionary emergence of novelty in a supposedly deterministic world which behavior is associated with those of the mathematical dynamical systems. The work was motivated by the observation of…

Adaptation and Self-Organizing Systems · Physics 2024-06-26 R. Herrero , F. Pi , J. Rius , G. Orriols

We examine the general question of statistical changes experienced by ensembles of nonlinear random waves propagating in systems ruled by integrable equations. In our study that enters within the framework of integrable turbulence, we…

Optics · Physics 2016-08-24 S. Randoux , P. Walczak , M. Onorato , P. Suret

Detecting and quantifying non-equilibrium activity is essential for studying internally driven assemblies, including synthetic active matter and complex living systems such as cells or tissue. We discuss a non-invasive approach of measuring…

Biological Physics · Physics 2019-05-22 Grzegorz Gradziuk , Federica Mura , Chase P. Broedersz

Limit cycle oscillations are phenomena arising in nonlinear dynamical systems and characterized by periodic, locally-stable, and self-sustained state trajectories. Systems controlled in a closed loop along a periodic trajectory can also be…

Systems and Control · Electrical Eng. & Systems 2023-03-20 Defne E. Ozan , Mingzhou Yin , Andrea Iannelli , Roy S. Smith

In this paper, we study the dynamics of a linear control system with given state feedback control law in the presence of fast periodic sampling at temporal frequency $1/\delta$ ($0 < \delta \ll 1$), together with small white noise…

Probability · Mathematics 2021-10-15 Shivam Dhama , Chetan D. Pahlajani

A limit cycle is a self-sustained periodic motion appearing in autonomous ordinary differential equations. As the period of the limit cycle is a-priori unknown, it is challenging to find them as stationary states of a rotating ansatz.…

Adaptation and Self-Organizing Systems · Physics 2023-08-14 Javier del Pino , Jan Košata , Oded Zilberberg

We study the diffusion of a tracer particle driven out-of-equilibrium by an external force and traveling in a dense environment of arbitrary density. The system evolves on a discrete lattice and its stochastic dynamics is described by a…

Statistical Mechanics · Physics 2018-05-23 Pierre Illien , Olivier Bénichou , Gleb Oshanin , Alessandro Sarracino , Raphaël Voituriez

We investigate the modes of oscillation of heterogeneous ring-networks of quadratic integrate-and-fire neurons with non-local, space-dependent coupling. Perturbations of the equilibrium state with a particular wave number produce transient…

Neurons and Cognition · Quantitative Biology 2017-11-15 Jose M. Esnaola-Acebes , Alex Roxin , Daniele Avitabile , Ernest Montbrió

The fluctuation in electric current in nonequilibrium steady states is investigated by molecular dynamics simulation of macroscopically uniform conductors. At low frequencies, appropriate decomposition of the spectral intensity of current…

Statistical Mechanics · Physics 2015-05-13 Tatsuro Yuge , Akira Shimizu

We study a model of rolling particles subject to stochastic fluctuations, which may be relevant in systems of nano- or micro-scale particles where rolling is an approximation for strong static friction. We consider the simplest possible…

Mathematical Physics · Physics 2016-10-04 Miranda Holmes-Cerfon

We study stochastic dynamics of an ensemble of N globally coupled excitable elements. Each element is modeled by a FitzHugh-Nagumo oscillator and is disturbed by independent Gaussian noise. In simulations of the Langevin dynamics we…

Statistical Mechanics · Physics 2009-11-11 M. Zaks , X. Sailer , L. Schimansky-Geier , A. Neiman

We have developed a linearization method to investigate the subthreshold oscillatory behaviors in nonlinear autonomous systems. By considering firstly the neuronal system as an example, we show that this theoretical approach can predict…

Quantitative Methods · Quantitative Biology 2007-05-23 Shenbing Kuang , Jiafu Wang , Ting Zeng , Aiyin Cao

We study the dynamics of a damped harmonic oscillator in the presence of a retarded potential with state-dependent time-delayed feedback. In the limit of small time-delays, we show that the oscillator is equivalent to a Li\'enard system.…

Quantum Physics · Physics 2023-04-26 Álvaro G. López

We investigate the dynamics of spin-nonequilibrium electron systems in the hydrodynamic flow regime, when the normal scattering processes, which conserve the total quasi-momentum of the system of electrons and quasi-particles that interact…

Mesoscale and Nanoscale Physics · Physics 2013-10-17 R. N. Gurzhi , A. N. Kalinenko , A. I. Kopeliovich , P. V. Pyshkin , S. B. Rutkevich , A. V. Yanovsky , A. N. Yashin

The presence of noise in non linear dynamical systems can play a constructive role, increasing the degree of order and coherence or evoking improvements in the performance of the system. An example of this positive influence in a biological…

Dynamical Systems · Mathematics 2016-09-07 M. -P. Zorzano , L. Vazquez

Noise-induced transitions between metastable fixed points in systems evolving on multiple time scales are analyzed in situations where the time scale separation gives rise to a slow manifold with bifurcation. This analysis is performed…

Statistical Mechanics · Physics 2017-10-05 Tobias Grafke , Eric Vanden-Eijnden

We study the dynamics of a symmetric two-level system strongly coupled to a broadened harmonic mode. Upon mapping the problem onto a spin-boson model with peaked spectral density, we show how analytic solutions can be obtained, at arbitrary…

Statistical Mechanics · Physics 2009-11-13 F. Nesi , M. Grifoni , E. Paladino