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Gene regulatory networks, i.e. DNA segments in a cell which interact with each other indirectly through their RNA and protein products, lie at the heart of many important intracellular signal transduction processes. In this paper we analyse…

Analysis of PDEs · Mathematics 2014-04-03 Mark Chaplain , Mariya Ptashnyk , Marc Sturrock

The sterile insect technique has emerged recently as a biologically secure and effective tool for suppressing wild mosquito pests. To improve the performance of this strategy, understanding the interaction between wild and sterile…

Dynamical Systems · Mathematics 2025-09-09 Rodrigo Fernández-Martínez , Alfonso Ruiz-Herrera

In the first part of this paper, we showed that three coupled populations of identical phase oscillators give rise to heteroclinic cycles between invariant sets where populations show distinct frequencies. Here, we now give explicit…

Dynamical Systems · Mathematics 2019-08-05 Christian Bick , Alexander Lohse

Recently, an evolutionary game dynamics model taking into account the environmental feedback has been proposed to describe the co-evolution of strategic actions of a population of individuals and the state of the surrounding environment;…

Systems and Control · Electrical Eng. & Systems 2022-05-24 Lulu Gong , Weijia Yao , Jian Gao , Ming Cao

Autonomous sustained oscillations are ubiquitous in living and nonliving systems. As open systems, far from thermodynamic equilibrium, they defy entropic laws which mandate convergence to stationarity. We present structural conditions on…

Dynamical Systems · Mathematics 2020-01-07 Bernold Fiedler

In this paper, experimental data is presented and a simple model is developed for the time evolution of a F-amp \textit{E. Coli} culture population. In general, the bacteria life cycle as revealed by monitoring a culture's population…

Populations and Evolution · Quantitative Biology 2019-12-19 Atanu Chatterjee , Nicholas Mears , Abigail Charest , Saad Algarni , Germano Iannnacchione

We consider a recently introduced model of mosquito dynamics that includes mating and progression through breeding, questing and egg-laying stages of mosquitoes using human and other vertebrate sources for blood meals. By exploiting a…

Populations and Evolution · Quantitative Biology 2024-11-12 J. Banasiak , Bime M. Ghakanyuy , Gideon A. Ngwa

Using a lattice model based on Monte Carlo simulations, we study the role of the reproduction pattern on the fate of an evolving population. Each individual is under the selection pressure from the environment and random mutations. The…

Statistical Mechanics · Physics 2009-11-10 Mingfeng He , Hongbo Ruan , Changliang Yu , Lei Yao

We present a result concerning the mean value of orbits emerging from Hopf bifurcations. We then apply this result to identify a new phenomenon termed {\it oscillation-induced gain modulation}. A Hopf bifurcation of a system $\dot{x} = f(x;…

Dynamical Systems · Mathematics 2025-10-07 William Harold Nesse , Cooper John Hutchinson

Saving energy and enhancing performance are secular preoccupations shared by both nature and human beings. In animal locomotion, flapping flyers or swimmers rely on the flexibility of their wings or body to passively increase their…

Biological Physics · Physics 2011-08-30 Sophie Ramananarivo , Ramiro Godoy-Diana , Benjamin Thiria

We study a triangular network of three populations of coupled phase oscillators with identical frequencies. The populations interact nonlocally, in the sense that all oscillators are coupled to one another, but more weakly to those in…

Adaptation and Self-Organizing Systems · Physics 2015-03-13 Erik Andreas Martens

The apparent stability of population oscillations in ecological systems is a long-standing puzzle. A generic solution for this problem is suggested here. The stabilizing mechanism involves the combined effect of spatial migration,…

Populations and Evolution · Quantitative Biology 2007-05-23 Refael Abta , Marcelo Schiffer , Avishag Ben-Ishay , Nadav M. Shnerb

We study a mosquito-borne epidemic model where the vector population is distinct in aquatic and adult stages and a saturating effect of disease transmission is assumed to ocurr when the number of infectious (humans and mosquitoes) becomes…

Populations and Evolution · Quantitative Biology 2014-02-10 E. Avila-Vales , B. Buonomo , N. Chan-Chi

Oscillating population model realistic situations in different contexts.We examine this situation with reasonable mathematical models and come to interesting conclusions,such as for example,that the population at most points of the cycle…

General Mathematics · Mathematics 2015-06-26 B S Lakshmi

Distortion products are tones produced through nonlinear effects of a system simultaneously detecting two or more frequencies. These combination tones are ubiquitous to vertebrate auditory systems and are generally regarded as byproducts of…

Biological Physics · Physics 2025-01-13 Justin Faber , Alexandros C Alampounti , Marcos Georgiades , Joerg T Albert , Dolores Bozovic

This work investigates the emergence of oscillations in one of the simplest cellular signaling networks exhibiting oscillations, namely, the dual-site phosphorylation and dephosphorylation network (futile cycle), in which the mechanism for…

Molecular Networks · Quantitative Biology 2019-02-05 Carsten Conradi , Maya Mincheva , Anne Shiu

Organisms often use cyclic changes in the concentrations of chemicals species to precisely time biological functions. Underlying these biochemical clocks are chemical reactions and transport processes, which are inherently stochastic.…

Statistical Mechanics · Physics 2020-02-06 Clara del Junco , Suriyanarayanan Vaikuntanathan

The phenomenon of slow switching in populations of globally coupled oscillators is discussed. This characteristic collective dynamics, which was first discovered in a particular class of the phase oscillator model, is a result of the…

Disordered Systems and Neural Networks · Physics 2009-10-31 Hiroshi Kori , Yoshiki Kuramoto

Feedback loops are major components of biochemical systems. Many systems show multiple such (positive or negative) feedback loops. Nevertheless, very few quantitative analyses address the question how such multiple feedback loops evolved.…

Quantitative Methods · Quantitative Biology 2010-03-08 M. Hafner , H. Koeppl , A. Wagner

Biochemical oscillations are ubiquitous in nature and allow organisms to properly time their biological functions. In this paper, we consider minimal Markov state models of nonequilibrium biochemical networks that support oscillations. We…

Statistical Mechanics · Physics 2020-02-04 Clara del Junco , Suriyanarayanan Vaikuntanathan