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Graph Neural Networks (GNNs) have excelled in predicting graph properties in various applications ranging from identifying trends in social networks to drug discovery and malware detection. With the abundance of new architectures and…

Machine Learning · Computer Science 2024-06-06 Roya Aliakbarisani , Robert Jankowski , M. Ángeles Serrano , Marián Boguñá

Many real life networks present an average path length logarithmic with the number of nodes and a degree distribution which follows a power law. Often these networks have also a modular and self-similar structure and, in some cases -…

Physics and Society · Physics 2010-02-17 Alicia Miralles , Francesc Comellas , Lichao Chen , Zhongzhi Zhang

Dense, stabilized, frictional particulate suspensions in a viscous liquid undergo increasingly strong continuous shear thickening (CST) as the solid packing fraction, $\phi$, increases above a critical volume fraction, and discontinuous…

Soft Condensed Matter · Physics 2020-04-01 Marcio Gameiro , Abhinendra Singh , Lou Kondic , Konstantin Mischaikow , Jeffrey F. Morris

Jamming is a phenomenon shared by a wide variety of systems, such as granular materials, foams, and glasses in their high density regime. This has motivated the development of a theoretical framework capable of explaining many of their…

Statistical Mechanics · Physics 2021-06-24 Rafael Díaz Hernández Rojas , Giorgio Parisi , Federico Ricci-Tersenghi

We use mathematical methods from the theory of tailored random graphs to study systematically the effects of sampling on topological features of large biological signalling networks. Our aim in doing so is to increase our quantitative…

Quantitative Methods · Quantitative Biology 2011-06-02 A. Annibale , A. C. C. Coolen

The statistical mechanical approach to complex networks is the dominant paradigm in describing natural and societal complex systems. The study of network properties, and their implications on dynamical processes, mostly focus on locally…

Statistical Mechanics · Physics 2013-06-27 Giovanni Petri , Martina Scolamiero , Irene Donato , Francesco Vaccarino

We present an experiment in which a horizontal quasi-2D granular system with a fixed neighbor network is cyclically compressed and decompressed over 1000 cycles. We remove basal friction by floating the particles on a thin air cushion, so…

Soft Condensed Matter · Physics 2017-08-02 Jonathan E. Kollmer , Karen E. Daniels

Many transport processes on networks depend crucially on the underlying network geometry, although the exact relationship between the structure of the network and the properties of transport processes remain elusive. In this paper we…

Physics and Society · Physics 2015-06-26 Bosiljka Tadic , G. J. Rodgers , Stefan Thurner

We probe the onset and effect of contact changes in 2D soft harmonic particle packings which are sheared quasistatically under controlled strain. First, we show that in the majority of cases, the first contact changes correspond to the…

Soft Condensed Matter · Physics 2016-12-28 Merlijn S. van Deen , Brian P. Tighe , Martin van Hecke

The heterogeneous force networks in static granular media --- formed from contact forces between grains and spanning from boundary to boundary in the packing --- are distinguished from other network structures in that they must satisfy…

Soft Condensed Matter · Physics 2010-08-11 Brian P. Tighe , Thijs J. H. Vlugt

In this contribution, cylindrical samples consisting of monodisperse soft (rubber) and stiff (glass) particles are pre-stressed under uniaxial compression. Acoustic P-waves at ultrasound frequencies are superimposed into prepared samples…

Materials Science · Physics 2021-12-24 Matthias Ruf , Kianoosh Taghizadeh , Holger Steeb

Our understanding of the elasticity and rheology of disordered materials, such as granular piles, foams, emulsions or dense suspensions relies on improving experimental tools to characterize their behaviour at the particle scale. While 2D…

Soft Condensed Matter · Physics 2010-09-24 Mohammad Saadatfar , Adrian P. Sheppard , Tim J. Senden , Alexandre J. Kabla

We perform a novel analysis of the granular texture of a granular bed close to stability limit. Our analysis is based on a unique criterion of friction mobilisation in a simulated two-dimensional packing. In this way, we recover the bimodal…

Soft Condensed Matter · Physics 2009-11-11 Lydie Staron , Farhang Radjai

In this thesis I present most of the results obtained during my PhD, where I worked on different subjects regarding jamming in systems of frictionless spheres. In particular, I focused on microscopic properties of jammed packings, such as…

Soft Condensed Matter · Physics 2021-07-09 Díaz Hernández Rojas , Rafael

We have developed different network approaches to analyze complex patterns of frictional interfaces (contact area developments). Network theory is a fundamental tool for the modern understanding of complex systems in which, by a simple…

General Physics · Physics 2012-01-04 H. O. Ghaffari , R. P. Young

This article discusses how the individual morphological properties of basic objects (e.g. neurons, molecules and aggregates), jointly with their particular spatial distribution, can determine the connectivity and dynamics of systems…

Molecular Networks · Quantitative Biology 2007-05-23 Luciano da Fontoura Costa

The relation between packing geometry and force network statistics is studied for granular media. Based on simulations of two-dimensional packings of Hertzian spheres, we develop a geometrical framework relating the distribution of…

Disordered Systems and Neural Networks · Physics 2007-05-23 Jacco H. Snoeijer , Martin van Hecke , Ellak Somfai , Wim van Saarloos

The evolution of the internal granular structure in shear-arrested and shear-flowing states of granular materials is characterized using fabric tensors as descriptors of the internal contact and force networks. When a dilute system of…

Soft Condensed Matter · Physics 2020-05-20 Ishan Srivastava , Jeremy B. Lechman , Gary S. Grest , Leonardo E. Silbert

This study investigates computationally the impact of particle size disparity and cohesion on force chain formation in granular media. The granular media considered in this study are bi-disperse systems under uniaxial compression,…

Soft Condensed Matter · Physics 2025-03-06 Ankit Shrivastava , Kaushik Dayal , Hae Young Noh

We identify two orthogonal sources of structural entropy in rattler-free granular systems - affine, involving structural changes that only deform the contact network, and topological, corresponding to different topologies of the contact…

Statistical Mechanics · Physics 2017-06-07 Shahar Amitai , Raphael Blumenfeld