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Let $\mathcal{T}$ be a rooted and weighted tree, where the weight of any node is equal to the sum of the weights of its children. The popular Treemap algorithm visualizes such a tree as a hierarchical partition of a square into rectangles,…

Computational Geometry · Computer Science 2013-12-17 Mark de Berg , Krzysztof Onak , Anastasios Sidiropoulos

A simple and computationally efficient scheme for tree-structured vector quantization is presented. Unlike previous methods, its quantization error depends only on the intrinsic dimension of the data distribution, rather than the apparent…

Machine Learning · Statistics 2008-05-12 Sanjoy Dasgupta , Yoav Freund

Binary trees are fundamental objects in models of evolutionary biology and population genetics. Here, we discuss some of their combinatorial and structural properties as they depend on the tree class considered. Furthermore, the process by…

Populations and Evolution · Quantitative Biology 2021-06-30 Thomas Wiehe

We assess advantages of expressing tree-structured Ising models via their mean parameterization rather than their commonly chosen canonical parameterization. This includes fixedness of marginal distributions, often convenient for dependence…

Statistics Theory · Mathematics 2025-07-29 Benjamin Côté , Hélène Cossette , Etienne Marceau

Designing well-connected graphs is a fundamental problem that frequently arises in various contexts across science and engineering. The weighted number of spanning trees, as a connectivity measure, emerges in numerous problems and plays a…

Data Structures and Algorithms · Computer Science 2016-04-13 Kasra Khosoussi , Gaurav S. Sukhatme , Shoudong Huang , Gamini Dissanayake

In this paper we introduce a general framework for the study of limits of relational structures in general and graphs in particular, which is based on a combination of model theory and (functional) analysis. We show how the various…

Combinatorics · Mathematics 2021-04-23 Jaroslav Nesetril , Patrice Ossona De Mendez

Phylogenetic trees are a central tool in understanding evolution. They are typically inferred from sequence data, and capture evolutionary relationships through time. It is essential to be able to compare trees from different data sources…

Populations and Evolution · Quantitative Biology 2017-10-31 Michelle Kendall , Caroline Colijn

Periodic trees are combinatorial structures which are in bijection with cluster tilting objects in cluster categories of affine type $\tilde{A}_{n-1}$. The internal edges of the tree encode the $c$-vectors corresponding to the cluster…

Representation Theory · Mathematics 2014-07-03 Kiyoshi Igusa , Gordana Todorov , Jerzy Weyman

Hierarchical tree structures are common in many real-world systems, from tree roots and branches to neuronal dendrites and biologically inspired artificial neural networks, as well as in technological networks for organizing and searching…

Statistical Mechanics · Physics 2025-02-04 Davide Cipollini , Lambert Schomaker

We show that for many models of random trees, the independence number divided by the size converges almost surely to a constant as the size grows to infinity; the trees that we consider include random recursive trees, binary and $m$-ary…

Probability · Mathematics 2020-03-23 Svante Janson

The classical matrix tree theorem relates the number of spanning trees of a connected graph with the product of the nonzero eigenvalues of its Laplacian matrix. The class of regular matroids generalizes that of graphical matroids, and a…

Combinatorics · Mathematics 2014-05-12 Aaron Dall , Julian Pfeifle

In order to develop statistical methods for shapes with a tree-structure, we construct a shape space framework for tree-like shapes and study metrics on the shape space. This shape space has singularities, corresponding to topological…

Methodology · Statistics 2012-07-24 Aasa Feragen , Pechin Lo , Marleen de Bruijne , Mads Nielsen , Francois Lauze

We prime-encode the natural numbers via recursive factorisation, iterated to the exponents, generating a corpus of planar rooted trees equivalently represented as Dyck words. This forms a deterministic text endowed with internal rules.…

Mathematical Physics · Physics 2025-12-02 Pierluigi Contucci , Claudio Giberti , Godwin Osabutey , Cecilia Vernia

The well-known Lawvere category R of extended real positive numbers comes with a monoidal closed structure where the tensor product is the sum. But R has another such structure, given by multiplication, which is *-autonomous. Normed sets,…

Category Theory · Mathematics 2007-05-23 Marco Grandis

This paper studies the "explanation problem" for tree- and linearly-ordered array data, a problem motivated by database applications and recently solved for the one-dimensional tree-ordered case. In this paper, one is given a matrix A whose…

Data Structures and Algorithms · Computer Science 2011-01-11 Howard Karloff , Flip Korn , Konstantin Makarychev , Yuval Rabani

We survey recent developments about random real trees, whose prototype is the Continuum Random Tree (CRT) introduced by Aldous in 1991. We briefly explain the formalism of real trees, which yields a neat presentation of the theory and in…

Probability · Mathematics 2007-05-23 J. F. Le Gall

Let $T$ be an infinite rooted tree with weights $w_e$ assigned to its edges. Denote by $m_n(T)$ the minimum weight of a path from the root to a node of the $n$th generation. We consider the possible behaviour of $m_n(T)$ with focus on the…

Probability · Mathematics 2014-11-18 Omid Amini , Luc Devroye , Simon Griffiths , Neil Olver

The Ward numbers $W(n,k)$ combinatorially enumerate set partitions with block sizes $\geq 2$ and phylogenetic trees (total partition trees). We prove that $W(n,k)$ also counts \emph{increasing Schr\"oder trees} by verifying they satisfy…

Combinatorics · Mathematics 2025-07-22 Elena L. Wang , Guoce Xin

In this paper, we study merge trees induced by a discrete Morse function on a tree. Given a discrete Morse function, we provide a method to constructing an induced merge tree and define a new notion of equivalence of discrete Morse…

Algebraic Topology · Mathematics 2020-07-21 Benjamin Johnson , Nicholas A. Scoville

The Random Projection Tree structures proposed in [Freund-Dasgupta STOC08] are space partitioning data structures that automatically adapt to various notions of intrinsic dimensionality of data. We prove new results for both the RPTreeMax…

Data Structures and Algorithms · Computer Science 2012-11-01 Aman Dhesi , Purushottam Kar