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A tanglegram consists of two binary rooted trees with the same number of leaves and a perfect matching between the leaves of the trees. We show that the two halves of a random tanglegram essentially look like two independently chosen random…

Combinatorics · Mathematics 2016-04-08 Matjaž Konvalinka , Stephan Wagner

A metric phylogenetic tree relating a collection of taxa induces weighted rooted triples and weighted quartets for all subsets of three and four taxa, respectively. New intertaxon distances are defined that can be calculated from these…

Populations and Evolution · Quantitative Biology 2020-02-12 Samaneh Yourdkhani , John A. Rhodes

Dissimilarity measures for (possibly weighted) phylogenetic trees based on the comparison of their vectors of path lengths between pairs of taxa, have been present in the systematics literature since the early seventies. But, as far as…

Populations and Evolution · Quantitative Biology 2008-07-06 Gabriel Cardona , Merce Llabres , Francesc Rossello , Gabriel Valiente

The hierarchical and recursive expressive capability of rooted trees is applicable to represent statistical models in various areas, such as data compression, image processing, and machine learning. On the other hand, such hierarchical…

Machine Learning · Computer Science 2022-01-25 Yuta Nakahara , Shota Saito , Akira Kamatsuka , Toshiyasu Matsushima

For a fixed set $X$, an arbitrary \textit{weight structure} $d \in [0,\infty]^{X \times X}$ can be interpreted as a distance assignment between pairs of points on $X$. Restrictions (i.e. \textit{metric axioms}) on the behaviour of any such…

General Topology · Mathematics 2014-10-22 Jorge Bruno , Ittay Weiss

We consider growing random recursive trees in random environment, in which at each step a new vertex is attached (by an edge of a random length) to an existing tree vertex according to a probability distribution that assigns the tree…

Probability · Mathematics 2007-05-23 Konstantin Borovkov , Vladimir Vatutin

Trees are partial orders in which every element has a linearly ordered set of predecessors. Here we initiate the exploration of the structural theory of trees with the study of different notions of \emph{branching in trees} and of…

Combinatorics · Mathematics 2023-01-18 Valentin Goranko , Ruaan Kellerman , Alberto Zanardo

Measuring the complexity of tree structures can be beneficial in areas that use tree data structures for storage, communication, and processing purposes. This complexity can then be used to compress tree data structures to their…

Information Theory · Computer Science 2023-09-19 Amirmohammad Farzaneh , Mihai-Alin Badiu , Justin P. Coon

A weighted recursive tree is an evolving tree in which vertices are assigned random vertex-weights and new vertices connect to a predecessor with a probability proportional to its weight. Here, we study the maximum degree and near-maximum…

Probability · Mathematics 2023-01-31 Laura Eslava , Bas Lodewijks , Marcel Ortgiese

Let $\mathcal{T}_n$ be the set of trees with $n$ vertices. Suppose that each tree in $\mathcal{T}_n$ is equally likely. We show that the number of different rooted trees of a tree equals $(\mu_r+o(1))n$ for almost every tree of…

Combinatorics · Mathematics 2013-05-21 Xueliang Li , Yiyang Li , Yongtang Shi

We study a random fragmentation process and its associated random tree. The process has earlier been studied by Dean and Majumdar (J. Phys. A: Math. Gen., vol. 35, L501--L507), who found a phase transition: the number of fragmentations is…

Probability · Mathematics 2007-05-23 S. Janson , R. Neininger

The perturbation expansion of the solution of a fixed point equation or of an ordinary differential equation may be expressed as a power series in the perturbation parameter. The terms in this series are indexed by rooted trees and depend…

Combinatorics · Mathematics 2021-03-30 William G. Faris

Let $T$ be a weighted tree. The weight of a subtree $T_1$ of $T$ is defined as the product of weights of vertices and edges of $T_1$. We obtain a linear-time algorithm to count the sum of weights of subtrees of $T$. As applications, we…

Combinatorics · Mathematics 2007-05-23 Weigen Yan , Yeong-Nan Yeh

Weighted recursive trees are built by adding successively vertices with predetermined weights to a tree: each new vertex is attached to a parent chosen at random with probability proportional to its weight. In the case where the total…

Probability · Mathematics 2022-07-12 Michel Pain , Delphin Sénizergues

We show that the class of finite rooted binary plane trees is a Ramsey class (with respect to topological embeddings that map leaves to leaves). That is, for all such trees P,H and every natural number k there exists a tree T such that for…

Combinatorics · Mathematics 2010-05-26 Manuel Bodirsky , Diana Piguet

In this article a collection of random self-similar fractal dendrites is constructed, and their Hausdorff dimension is calculated. Previous results determining this quantity for random self-similar structures have relied on geometrical…

Probability · Mathematics 2012-10-23 David A. Croydon

We discuss a notion of convergence for binary trees that is based on subtree sizes. In analogy to recent developments in the theory of graphs, posets and permutations we investigate some general aspects of the topology, such as a…

Combinatorics · Mathematics 2024-02-14 Rudolf Grübel

Quasi-trees generalize trees in that the unique "path" between two nodes may be infinite and have any countable order type. They are used to define the rank-width of a countable graph in such a way that it is equal to the least upper-bound…

Logic in Computer Science · Computer Science 2023-06-22 Bruno Courcelle

A rooted tree is balanced if the degree of a vertex depends only on its distance to the root. In this paper we determine the sharp threshold for the appearance of a large family of balanced spanning trees in the random geometric graph…

Combinatorics · Mathematics 2023-03-28 Alberto Espuny Díaz , Lyuben Lichev , Dieter Mitsche , Alexandra Wesolek

The conformations of topologically constrained double-folded ring polymers can be described as wrappings of randomly branched primitive trees. We extend previous work on the tree statistics under different (solvent) conditions to explore…

Soft Condensed Matter · Physics 2019-01-23 Angelo Rosa , Ralf Everaers