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This paper addresses the challenges posed by the unstructured nature and high-dimensional semantic complexity of electronic health record texts. A deep learning method based on attention mechanisms is proposed to achieve unified modeling…

Computation and Language · Computer Science 2025-07-03 Ting Xu , Xiaoxiao Deng , Xiandong Meng , Haifeng Yang , Yan Wu

Automated entity relation extraction (RE) from literature provides an important source for constructing biomedical database, which is more efficient and extensible than manual curation. However, existing RE models usually ignore the…

Computation and Language · Computer Science 2019-06-25 Lixiang Hong , JinJian Lin , Jiang Tao , Jianyang Zeng

Causal knowledge extraction is the task of extracting relevant causes and effects from text by detecting the causal relation. Although this task is important for language understanding and knowledge discovery, recent works in this domain…

Computation and Language · Computer Science 2023-08-09 Anik Saha , Oktie Hassanzadeh , Alex Gittens , Jian Ni , Kavitha Srinivas , Bulent Yener

Relation extraction (RE) is a standard information extraction task playing a major role in downstream applications such as knowledge discovery and question answering. Although decoder-only large language models are excelling in generative…

Computation and Language · Computer Science 2025-07-28 Yuhang Jiang , Ramakanth Kavuluru

Emotion cause extraction aims to identify the reasons behind a certain emotion expressed in text. It is a much more difficult task compared to emotion classification. Inspired by recent advances in using deep memory networks for question…

Computation and Language · Computer Science 2017-09-26 Lin Gui , Jiannan Hu , Yulan He , Ruifeng Xu , Qin Lu , Jiachen Du

Distant Supervised Relation Extraction (DSRE) is usually formulated as a problem of classifying a bag of sentences that contain two query entities, into the predefined relation classes. Most existing methods consider those relation classes…

Computation and Language · Computer Science 2019-12-16 Yanjie Gou , Yinjie Lei , Lingqiao Liu , Pingping Zhang , Xi Peng

Event Argument extraction refers to the task of extracting structured information from unstructured text for a particular event of interest. The existing works exhibit poor capabilities to extract causal event arguments like Reason and…

Computation and Language · Computer Science 2021-05-04 Debanjana Kar , Sudeshna Sarkar , Pawan Goyal

The goal of dialogue relation extraction (DRE) is to identify the relation between two entities in a given dialogue. During conversations, speakers may expose their relations to certain entities by explicit or implicit clues, such evidences…

Computation and Language · Computer Science 2022-07-26 Po-Wei Lin , Shang-Yu Su , Yun-Nung Chen

The drug discovery stage is a vital aspect of the drug development process and forms part of the initial stages of the development pipeline. In recent times, machine learning-based methods are actively being used to model drug-target…

Machine Learning · Computer Science 2020-09-02 Brighter Agyemang , Wei-Ping Wu , Michael Yelpengne Kpiebaareh , Zhihua Lei , Ebenezer Nanor , Lei Chen

Problem lists are intended to provide clinicians with a relevant summary of patient medical issues and are embedded in many electronic health record systems. Despite their importance, problem lists are often cluttered with resolved or…

Information Retrieval · Computer Science 2020-08-05 Justin Lovelace , Nathan C. Hurley , Adrian D. Haimovich , Bobak J. Mortazavi

Event extraction (EE) is a crucial information extraction task that aims to extract event information in texts. Most existing methods assume that events appear in sentences without overlaps, which are not applicable to the complicated…

Computation and Language · Computer Science 2021-07-06 Jiawei Sheng , Shu Guo , Bowen Yu , Qian Li , Yiming Hei , Lihong Wang , Tingwen Liu , Hongbo Xu

Document-level relation extraction is a complex human process that requires logical inference to extract relationships between named entities in text. Existing approaches use graph-based neural models with words as nodes and edges as…

Computation and Language · Computer Science 2019-09-04 Fenia Christopoulou , Makoto Miwa , Sophia Ananiadou

With the increased availability of large databases of electronic health records (EHRs) comes the chance of enhancing health risks screening. Most post-marketing detections of adverse drug reaction (ADR) rely on physicians' spontaneous…

Applications · Statistics 2018-01-29 Maryan Morel , Emmanuel Bacry , Stéphane Gaïffas , Agathe Guilloux , Fanny Leroy

Neural sequence-to-sequence networks with attention have achieved remarkable performance for machine translation. One of the reasons for their effectiveness is their ability to capture relevant source-side contextual information at each…

Computation and Language · Computer Science 2018-10-02 Lesly Miculicich Werlen , Nikolaos Pappas , Dhananjay Ram , Andrei Popescu-Belis

Most information extraction methods focus on binary relations expressed within single sentences. In high-value domains, however, $n$-ary relations are of great demand (e.g., drug-gene-mutation interactions in precision oncology). Such…

Computation and Language · Computer Science 2019-06-28 Robin Jia , Cliff Wong , Hoifung Poon

In the sentiment attitude extraction task, the aim is to identify <<attitudes>> -- sentiment relations between entities mentioned in text. In this paper, we provide a study on attention-based context encoders in the sentiment attitude…

Computation and Language · Computer Science 2020-07-01 Nicolay Rusnachenko , Natalia Loukachevitch

The performance of relation extraction models has increased considerably with the rise of neural networks. However, a key issue of neural relation extraction is robustness: the models do not scale well to long sentences with multiple…

Computation and Language · Computer Science 2021-04-23 Heike Adel , Jannik Strötgen

Adverse drug reaction (ADR) detection is an essential task in the medical field, as ADRs have a gravely detrimental impact on patients' health and the healthcare system. Due to a large number of people sharing information on social media…

Computation and Language · Computer Science 2023-08-21 Yunzhi Qiu , Xiaokun Zhang , Weiwei Wang , Tongxuan Zhang , Bo Xu , Hongfei Lin

Emotion-cause pair extraction (ECPE), an emerging task in sentiment analysis, aims at extracting pairs of emotions and their corresponding causes in documents. This is a more challenging problem than emotion cause extraction (ECE), since it…

Computation and Language · Computer Science 2021-04-16 Qixuan Sun , Yaqi Yin , Hong Yu

Event extraction is typically modeled as a multi-class classification problem where event types and argument roles are treated as atomic symbols. These approaches are usually limited to a set of pre-defined types. We propose a novel event…

Computation and Language · Computer Science 2022-03-23 Sijia Wang , Mo Yu , Shiyu Chang , Lichao Sun , Lifu Huang