Related papers: Chernoff Information between Gaussian Trees
We consider two notions describing how one finite graph may be larger than another. Using them, we prove several theorems for such pairs that compare the number of spanning trees, the return probabilities of random walks, and the number of…
We introduce a graph partitioning problem motivated by computational topology and propose two algorithms that produce approximate solutions. Specifically, given a weighted, undirected graph $G$ and a positive integer $k$, we desire to find…
In Athreya, L\"ohr, Winter (2016), an invariance principle is stated for a class of strong Markov processes on tree-like metric measure spaces. It is shown that if the underlying spaces converge Gromov vaguely, then the processes converge…
Tree-based protocols are ubiquitous in distributed systems. They are flexible, they perform generally well, and, in static conditions, their analysis is mostly simple. Under churn, however, node joins and failures can have complex global…
The aim of this paper is to propose a novel framework to infer the sheaf Laplacian, including the topology of a graph and the restriction maps, from a set of data observed over the nodes of a graph. The proposed method is based on sheaf…
Deep neural networks have proved very successful in domains where large training sets are available, but when the number of training samples is small, their performance suffers from overfitting. Prior methods of reducing overfitting such as…
One of the key problems of GNNs is how to describe the importance of neighbor nodes in the aggregation process for learning node representations. A class of GNNs solves this problem by learning implicit weights to represent the importance…
Transposable data represents interactions among two sets of entities, and are typically represented as a matrix containing the known interaction values. Additional side information may consist of feature vectors specific to entities…
Graph-structured data are pervasive across domains including social networks, biological networks, and knowledge graphs. Due to their non-Euclidean nature, such data pose significant challenges to conventional machine learning methods. This…
Graph Neural Networks (GNNs) have become the de facto standard for learning on relational data. While traditional GNNs' message passing is well suited for vector-valued node features, there are cases in which node features are better…
In latent Gaussian trees the pairwise correlation signs between the variables are intrinsically unrecoverable. Such information is vital since it completely determines the direction in which two variables are associated. In this work, we…
Background: Inference of gene regulatory networks from transcriptomic data has been a wide research area in recent years. Proposed methods are mainly based on the use of graphical Gaussian models for observational wild-type data and provide…
Let $\mathcal{G}$ be the set of simple graphs (or multigraphs) $G$ such that for each $G \in \mathcal{G}$ there exists at least two non-empty disjoint proper subsets $V_{1},V_{2}\subseteq V(G)$ satisfying $V(G)\setminus(V_{1} \cup…
In this paper we study several problems concerning the number of homomorphisms of trees. We give an algorithm for the number of homomorphisms from a tree to any graph by the Transfer-matrix method. By using this algorithm and some…
We propose a method for the classification of objects that are structured as random trees. Our aim is to model a distribution over the node label assignments in settings where the tree data structure is associated with node attributes…
Graph coarsening aims to reduce the size of a large graph while preserving some of its key properties, which has been used in many applications to reduce computational load and memory footprint. For instance, in graph machine learning,…
Many scientific problems require to process data in the form of geometric graphs. Unlike generic graph data, geometric graphs exhibit symmetries of translations, rotations, and/or reflections. Researchers have leveraged such inductive bias…
Let $G$ be a graph and $T_1,T_2$ be two spanning trees of $G$. We say that $T_1$ can be transformed into $T_2$ via an edge flip if there exist two edges $e \in T_1$ and $f$ in $T_2$ such that $T_2= (T_1 \setminus e) \cup f$. Since spanning…
In a previous paper (C. Cafaro et al., 2012), we compared an uncorrelated 3D Gaussian statistical model to an uncorrelated 2D Gaussian statistical model obtained from the former model by introducing a constraint that resembles the quantum…
Structural information of phylogenetic tree topologies plays an important role in phylogenetic inference. However, finding appropriate topological structures for specific phylogenetic inference tasks often requires significant design effort…