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Analysis of probability distributions conditional on species trees has demonstrated the existence of anomalous ranked gene trees (ARGTs), ranked gene trees that are more probable than the ranked gene tree that accords with the ranked…

Populations and Evolution · Quantitative Biology 2014-07-14 Filippo Disanto , Noah A. Rosenberg

We consider the biased random walk on a tree constructed from the set of finite self-avoiding walks on a lattice, and use it to construct probability measures on infinite self-avoiding walks. The limit measure (if it exists) obtained when…

Probability · Mathematics 2019-12-25 Vincent Beffara , Cong Bang Huynh

In a random linear graph, vertices are points on a line, and pairs of vertices are connected, independently, with a link probability that decreases with distance. We study the problem of reconstructing the linear embedding from the graph,…

Combinatorics · Mathematics 2020-05-25 Israel Rocha , Jeannette Janssen , Nauzer Kalyaniwalla

We investigate vertex levels of containment in a random hypergraph grown in the spirit of a recursive tree. We consider a local profile tracking the evolution of the containment of a particular vertex over time, and a global profile…

Probability · Mathematics 2021-01-19 Joshua Sparks , Srinivasan Balaji , Hosam Mahmoud

The hierarchical and recursive expressive capability of rooted trees is applicable to represent statistical models in various areas, such as data compression, image processing, and machine learning. On the other hand, such hierarchical…

Machine Learning · Computer Science 2022-01-25 Yuta Nakahara , Shota Saito , Akira Kamatsuka , Toshiyasu Matsushima

A bargraph is a self-avoiding lattice path with steps $U=(0,1)$, $H=(1,0)$ and $D=(0,-1)$ that starts at the origin and ends on the $x$-axis, and stays strictly above the $x$-axis everywhere except at the endpoints. Bargraphs have been…

Combinatorics · Mathematics 2016-09-02 Emeric Deutsch , Sergi Elizalde

A relaxed $k$-ary tree is an ordered directed acyclic graph with a unique source and sink in which every node has out-degree $k$. These objects arise in the compression of trees in which some repeated subtrees are factored and repeated…

Combinatorics · Mathematics 2024-04-15 Manosij Ghosh Dastidar , Michael Wallner

We study alternating minimization for matrix completion in the simplest possible setting: completing a rank-one matrix from a revealed subset of the entries. We bound the asymptotic convergence rate by the variational characterization of…

Machine Learning · Computer Science 2020-08-13 Rui Liu , Alex Olshevsky

We review results on linearly edge-reinforced random walks. On finite graphs, the process has the same distribution as a mixture of reversible Markov chains. This has applications in Bayesian statistics and it has been used in studying the…

Probability · Mathematics 2007-05-23 Franz Merkl , Silke W. W. Rolles

The standard coherence criterion for lower previsions is expressed using an infinite number of linear constraints. For lower previsions that are essentially defined on some finite set of gambles on a finite possibility space, we present a…

Artificial Intelligence · Computer Science 2012-03-19 Erik Quaeghebeur

We consider Markov chains on partially ordered sets that generalize the success-runs and remaining life chains in reliability theory. We find conditions for recurrence and transience and give simple expressions for the invariant…

Probability · Mathematics 2010-04-08 Kyle Siegrist

In the regime of Galton-Watson trees, first order logic statements are roughly equivalent to examining the presence of specific finite subtrees. We consider the space of all trees with Poisson offspring distribution and show that such…

Probability · Mathematics 2016-12-06 Joel Spencer , Moumanti Podder

We consider exact enumerations and probabilistic properties of ranked trees when generated under the random coalescent process. Using a new approach, based on generating functions, we derive several statistics such as the exact probability…

Combinatorics · Mathematics 2012-08-21 Filippo Disanto , Thomas Wiehe

Let $\mathcal {T}^{\Delta}_n$ denote the set of trees of order $n$, in which the degree of each vertex is bounded by some integer $\Delta$. Suppose that every tree in $\mathcal {T}^{\Delta}_n$ is equally likely. For any given subtree $H$,…

Combinatorics · Mathematics 2010-05-10 Xueliang LI , Yiyang Li

This paper is a variation on the uniform spanning tree theme. We use random spanning forests to solve the following problem: for a Markov process on a finite set of size $n$, find a probability law on the subsets of any given size $m \leq…

Probability · Mathematics 2016-02-01 Luca Avena , Alexandre Gaudillière

A dynamic model for a random network evolving in continuous time is defined where new vertices are born and existing vertices may die. The fitness of a vertex is defined as the accumulated in-degree of the vertex and a new vertex is…

Probability · Mathematics 2015-09-24 Maria Deijfen

We study randomized variants of two classical algorithms: coordinate descent for systems of linear equations and iterated projections for systems of linear inequalities. Expanding on a recent randomized iterated projection algorithm of…

Optimization and Control · Mathematics 2008-06-19 D. Leventhal , A. S. Lewis

We derive tight bounds on the expected weights of several combinatorial optimization problems for random point sets of size $n$ distributed among the leaves of a balanced hierarchically separated tree. We consider {\it monochromatic} and…

Discrete Mathematics · Computer Science 2013-07-29 Béla Csaba , Thomas A. Plick , Ali Shokoufandeh

We study the energy per vertex in regular graphs. For every k, we give an upper bound for the energy per vertex of a k-regular graph, and show that a graph attains the upper bound if and only if it is the disjoint union of incidence graphs…

Combinatorics · Mathematics 2014-06-13 Edwin R. van Dam , Willem H. Haemers , Jack H. Koolen

We study the watermelon probabilities in the uniform spanning forests on the two-dimensional semi-infinite square lattice near either open or closed boundary to which the forests can or cannot be rooted, respectively. We derive universal…

Mathematical Physics · Physics 2023-02-03 Khaydar Nurligareev , Alexander Povolotsky
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