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Vision Transformers (ViTs) have gained significant popularity in the natural image domain but have been less successful in 3D medical image segmentation. Nevertheless, 3D ViTs are particularly interesting for large medical imaging volumes…

Computer Vision and Pattern Recognition · Computer Science 2025-10-30 Benjamin Jin , Grant Mair , Joanna M. Wardlaw , Maria del C. Valdés Hernández

We present a novel, parameter-efficient and practical fully convolutional neural network architecture, termed InfiNet, aimed at voxel-wise semantic segmentation of infant brain MRI images at iso-intense stage, which can be easily extended…

Computer Vision and Pattern Recognition · Computer Science 2018-10-16 Shubham Kumar , Sailesh Conjeti , Abhijit Guha Roy , Christian Wachinger , Nassir Navab

Traumatic brain injuries could cause intracranial hemorrhage (ICH). ICH could lead to disability or death if it is not accurately diagnosed and treated in a time-sensitive procedure. The current clinical protocol to diagnose ICH is…

Image and Video Processing · Electrical Eng. & Systems 2019-11-18 Murtadha D. Hssayeni , M. S. , Muayad S. Croock , Ph. D. , Aymen Al-Ani , Ph. D. , Hassan Falah Al-khafaji , M. D. , Zakaria A. Yahya , M. D. , Behnaz Ghoraani , Ph. D

We recently published a deep learning study on the potential of encoder-decoder networks for the segmentation of the 2D CAMUS ultrasound dataset. We propose in this abstract an extension of the evaluation criteria to anatomical assessment,…

We present MedicDeepLabv3+, a convolutional neural network that is the first completely automatic method to segment cerebral hemispheres in magnetic resonance (MR) volumes of rats with lesions. MedicDeepLabv3+ improves the state-of-the-art…

Image and Video Processing · Electrical Eng. & Systems 2022-10-04 Juan Miguel Valverde , Artem Shatillo , Riccardo de Feo , Jussi Tohka

Masked autoencoders (MAE) have shown great promise in medical image classification. However, the random masking strategy employed by traditional MAEs may overlook critical areas in medical images, where even subtle changes can indicate…

Computer Vision and Pattern Recognition · Computer Science 2026-05-27 Joao Batista Florindo , Viviane de Moura

Carotid artery vessel wall thickness measurement is an essential step in the monitoring of patients with atherosclerosis. This requires accurate segmentation of the vessel wall, i.e., the region between an artery's lumen and outer wall, in…

Image and Video Processing · Electrical Eng. & Systems 2021-12-03 Dieuwertje Alblas , Christoph Brune , Jelmer M. Wolterink

To safely deploy deep learning models in the clinic, a quality assurance framework is needed for routine or continuous monitoring of input-domain shift and the models' performance without ground truth contours. In this work, cardiac…

Image and Video Processing · Electrical Eng. & Systems 2023-05-22 Xiyao Jin , Yao Hao , Jessica Hilliard , Zhehao Zhang , Maria A. Thomas , Hua Li , Abhinav K. Jha , Geoffrey D. Hugo

Accurate segmentation for medical images is important for clinical diagnosis. Existing automatic segmentation methods are mainly based on fully supervised learning and have an extremely high demand for precise annotations, which are very…

Computer Vision and Pattern Recognition · Computer Science 2021-06-10 Yuanpeng Liu , Qinglei Hui , Zhiyi Peng , Shaolin Gong , Dexing Kong

Glioma is the most common and aggressive brain tumor. Magnetic resonance imaging (MRI) plays a vital role to evaluate tumors for the arrangement of tumor surgery and the treatment of subsequent procedures. However, the manual segmentation…

Image and Video Processing · Electrical Eng. & Systems 2022-03-23 Wenbo Zhang , Guang Yang , He Huang , Weiji Yang , Xiaomei Xu , Yongkai Liu , Xiaobo Lai

Masked autoencoders (MAE) have become a dominant paradigm in 3D representation learning, setting new performance benchmarks across various downstream tasks. Existing methods with fixed mask ratio neglect multi-level representational…

Computer Vision and Pattern Recognition · Computer Science 2026-05-08 Lintong Wei , Jian Lu , Haozhe Cheng , Jihua Zhu , Kaibing Zhang

Automated lumbar spine segmentation is very crucial for modern diagnosis systems. In this study, we introduce a novel machine-agnostic approach for segmenting lumbar vertebrae and intervertebral discs from MRI images, employing a cascaded…

Image and Video Processing · Electrical Eng. & Systems 2024-11-26 Promit Basak , Rusab Sarmun , Saidul Kabir , Israa Al-Hashimi , Enamul Hoque Bhuiyan , Anwarul Hasan , Muhammad Salman Khan , Muhammad E. H. Chowdhury

Deep learning methods for classifying medical images have demonstrated impressive accuracy in a wide range of tasks but often these models are hard to interpret, limiting their applicability in clinical practice. In this work we introduce a…

Image and Video Processing · Electrical Eng. & Systems 2019-08-13 James R. Clough , Ilkay Oksuz , Esther Puyol-Anton , Bram Ruijsink , Andrew P. King , Julia A. Schnabel

Computer-aided medical image analysis plays a significant role in assisting medical practitioners for expert clinical diagnosis and deciding the optimal treatment plan. At present, convolutional neural networks (CNN) are the preferred…

Image and Video Processing · Electrical Eng. & Systems 2022-04-29 S Niyas , S J Pawan , M Anand Kumar , Jeny Rajan

This study leverages convolutional neural networks to enhance the temporal resolution of 3D angiography in intracranial aneurysms focusing on the reconstruction of volumetric contrast data from sparse and limited projections. Three…

Neuroanatomical segmentation in magnetic resonance imaging (MRI) of the brain is a prerequisite for volume, thickness and shape measurements. This work introduces a new highly accurate and versatile method based on 3D convolutional neural…

Quantitative Methods · Quantitative Biology 2019-02-07 Philip Novosad , Vladimir Fonov , D. Louis Collins

Automatic medical image segmentation based on Computed Tomography (CT) has been widely applied for computer-aided surgery as a prerequisite. With the development of deep learning technologies, deep convolutional neural networks (DCNNs) have…

Image and Video Processing · Electrical Eng. & Systems 2021-04-09 Wenqiang Li , YM Tang , Ziyang Wang , KM Yu , Sandy To

Deep Neural Networks - especially Convolutional Neural Network (ConvNet) has become the state-of-the-art for image classification, pattern recognition and various computer vision tasks. ConvNet has a huge potential in medical domain for…

Computer Vision and Pattern Recognition · Computer Science 2020-09-11 Md Motiur Rahman Sagar , Martin Dyrba

Coronary Artery Disease (CAD) diagnostic to be a major global cause of death, necessitating innovative solutions. Addressing the critical importance of early CAD detection and its impact on the mortality rate, we propose the potential of…

Signal Processing · Electrical Eng. & Systems 2024-06-26 Atitaya Phoemsuk , Vahid Abolghasemi

Convolutional networks have become state-of-the-art techniques for automatic medical image analysis, with the U-net architecture being the most popular at this moment. In this article we report the application of a 3D version of U-net to…

Computer Vision and Pattern Recognition · Computer Science 2018-06-20 Germonda Mooij , Ines Bagulho , Henkjan Huisman