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A one-dimensional model on a line of the length L is investigated, which involves particle diffusion as well as single particle annihilation. There are also creation and annihilation at the boundaries. The static and dynamical behaviors of…

Mathematical Physics · Physics 2014-03-17 Mohammad Khorrami , Amir Aghamohammadi

We show that the Turing patterns in reaction systems with subdiffusion can be replicated in an effective system with Markovian cross-diffusion. The effective system has the same Turing instability as the original system, and the same…

Pattern Formation and Solitons · Physics 2020-01-29 Joseph W. Baron , Tobias Galla

In this paper, a thermal-dynamical consistent model for mass transfer across permeable moving interfaces is proposed by using the energy variation method. We consider a restricted diffusion problem where the flux across the interface…

Numerical Analysis · Mathematics 2022-06-15 Yuzhe Qin , Huaxiong Huang , Yi Zhu , Chun Liu , Shixin Xu

This article is concerned with the mathematical analysis of a family of adaptive importance sampling algorithms applied to diffusion processes. These methods, referred to as Adaptive Biasing Potential methods, are designed to efficiently…

Probability · Mathematics 2018-05-10 Michel Benaïm , Charles-Edouard Bréhier

A major challenge in flow through porous media is to better understand the link between microstructure and macroscale flow and transport. For idealised microstructures, the mathematical framework of homogenisation theory can be used for…

The migration of active particles in slowly moving, crowded, and heterogeneous media is fundamental to various biological processes and technological applications, such as cargo transport. In this study, we numerically investigate the…

Soft Condensed Matter · Physics 2024-12-04 Meng-Yuan Li , Ning Zheng , Yan-Wei Li

The diffusion of molecules in complex intracellular environments can be strongly influenced by spatial heterogeneity and stochasticity. A key challenge when modelling such processes using stochastic random walk frameworks is that negative…

Biological Physics · Physics 2019-01-31 Elliot J. Carr , Matthew J. Simpson

An anisotropic random barrier model is presented, in which the transition probabilities in different directions have different probability density functions. At low temperatures, the anisotropic long--time diffusion coefficients, obtained…

Disordered Systems and Neural Networks · Physics 2009-11-10 Sebastian Bustingorry

Lateral diffusion of molecules on surfaces plays a very important role in various biological processes, including lipid transport across the cell membrane, synaptic transmission and other phenomena such as exo- and endocytosis, signal…

Analysis of PDEs · Mathematics 2013-11-12 A. B. Duncan , C. M. Elliott , G. A. Pavliotis , A. M. Stuart

Mathematical models of diffusive transport underpin our understanding of chemical, biochemical and biological transport phenomena. Analysis of such models often focusses on relatively simple geometries and deals with diffusion through…

Biological Physics · Physics 2020-08-27 Elliot J. Carr , Jacob M. Ryan , Matthew J. Simpson

Perturbations of fluid media can give rise to non-equilibrium dynamics, which may in turn cause motion of immersed inclusions. We consider perturbations ("activations") that are local in space and time, of a fluid density which is…

Statistical Mechanics · Physics 2020-03-18 Christian M. Rohwer , Mehran Kardar , Matthias Krüger

Inverse problems arise in a multitude of applications, where the goal is to recover a clean signal from noisy and possibly (non)linear observations. The difficulty of a reconstruction problem depends on multiple factors, such as the ground…

Image and Video Processing · Electrical Eng. & Systems 2024-08-21 Zalan Fabian , Berk Tinaz , Mahdi Soltanolkotabi

We propose a new model to describe diffusion processes within active deformable media. Our general theoretical framework is based on physical and mathematical considerations, and it suggests to use diffusion tensors directly coupled to…

Tissues and Organs · Quantitative Biology 2021-03-03 Christian Cherubini , Simonetta Filippi , Alessio Gizzi , Ricardo Ruiz-Baier

Fluids confined to quasi-one-dimensional channels exhibit a dynamic crossover from single file diffusion to normal diffusion as the channel becomes wide enough for particles to hop past each other. In the crossover regime, where hopping…

Soft Condensed Matter · Physics 2019-07-24 Sheida Ahmadi , Marina Schmidt , Raymond J. Spiteri , Richard K. Bowles

Analytical method for the second-order homogenization of two-phase composites within Mindlin-Toupin strain gradient elasticity theory is proposed. Direct approach and self-consistent approximation are used to reduce the homogenization…

Materials Science · Physics 2021-12-24 Y. O. Solyaev

We resolve a long standing question regarding the suitable effective diffusion coefficient of the spherically-symmetric transport equation, which is valid at long times. To that end, we generalize a transport solution in three dimensions…

Statistical Mechanics · Physics 2024-02-01 Shay I. Heizler , Menahem Krief , Michael Assaf

Most biochemical reactions in living cells rely on diffusive search for target molecules or regions in a heterogeneous overcrowded cytoplasmic medium. Rapid re-arrangements of the medium constantly change the effective diffusivity felt…

Statistical Mechanics · Physics 2019-11-13 Yann Lanoiselée , Nicolas Moutal , Denis S. Grebenkov

The aim of the present study is to derive the effective quasi-static behaviour of a composite medium, made of a poroelastic matrix containing elastic impervious inclusions. For this purpose, the asymptotic homogenisation method is used. On…

Soft Condensed Matter · Physics 2019-02-15 Pascale Royer , Pierre Recho , Claude Verdier

In this work the diffusion in the quenched trap model with diverging mean waiting times is examined. The approach of randomly stopped time is extensively applied in order to obtain asymptotically exact representation of the disorder…

Statistical Mechanics · Physics 2020-07-21 Stanislav Burov

In this paper, we deal with distributed estimation problems in diffusion networks with heterogeneous nodes, i.e., nodes that either implement different adaptive rules or differ in some other aspect such as the filter structure or length, or…

Systems and Control · Computer Science 2017-09-05 Jesus Fernandez-Bes , Jerónimo Arenas-García , Magno T. M. Silva , Luis A. Azpicueta-Ruiz