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We establish tight bi-Lipschitz bounds certifying quasi-universality (universality up to a constant factor) for various distances between Reeb graphs: the interleaving distance, the functional distortion distance, and the functional…

Geometric Topology · Mathematics 2023-09-14 Ulrich Bauer , Håvard Bakke Bjerkevik , Benedikt Fluhr

We study the characterization of several distance problems for linear differential-algebraic systems with dissipative Hamiltonian structure. Since all models are only approximations of reality and data are always inaccurate, it is an…

Numerical Analysis · Mathematics 2020-01-27 Christian Mehl , Volker Mehrmann , Michal Wojtylak

Persistent Topology studies topological features of shapes by analyzing the lower level sets of suitable functions, called filtering functions, and encoding the arising information in a parameterized version of the Betti numbers, i.e. the…

Algebraic Topology · Mathematics 2010-05-05 Andrea Cerri , Patrizio Frosini

Persistent homology is a popular computational tool for analyzing the topology of point clouds, such as the presence of loops or voids. However, many real-world datasets with low intrinsic dimensionality reside in an ambient space of much…

Machine Learning · Computer Science 2024-11-01 Sebastian Damrich , Philipp Berens , Dmitry Kobak

Graph embeddings have emerged as a powerful tool for representing complex network structures in a low-dimensional space, enabling the use of efficient methods that employ the metric structure in the embedding space as a proxy for the…

Social and Information Networks · Computer Science 2024-04-18 Radosław Nowak , Adam Małkowski , Daniel Cieślak , Piotr Sokół , Paweł Wawrzyński

One-dimensional persistent homology is arguably the most important and heavily used computational tool in topological data analysis. Additional information can be extracted from datasets by studying multi-dimensional persistence modules and…

Algebraic Topology · Mathematics 2023-08-31 Facundo Mémoli , Anastasios Stefanou , Ling Zhou

Persistence has proved to be a valuable tool to analyze real world data robustly. Several approaches to persistence have been attempted over time, some topological in flavor, based on the vector space-valued homology functor, other…

Algebraic Topology · Mathematics 2019-05-23 Mattia G. Bergomi , Pietro Vertechi

We prove results on the decidability and complexity of computing the total variation distance (equivalently, the $L_1$-distance) of hidden Markov models (equivalently, labelled Markov chains). This distance measures the difference between…

Formal Languages and Automata Theory · Computer Science 2018-04-18 Stefan Kiefer

Topological Data Analysis methods can be useful for classification and clustering tasks in many different fields as they can provide two dimensional persistence diagrams that summarize important information about the shape of potentially…

Quantum Physics · Physics 2024-09-02 Bernardo Ameneyro , Rebekah Herrman , George Siopsis , Vasileios Maroulas

The persistence diagram of Cohen-Steiner, Edelsbrunner, and Harer was recently generalized by Patel to the case of constructible persistence modules with values in a symmetric monoidal category with images. Patel also introduced a distance…

Algebraic Topology · Mathematics 2017-10-05 Ville Puuska

We address the problem of estimating topological features from data in high dimensional Euclidean spaces under the manifold assumption. Our approach is based on the computation of persistent homology of the space of data points endowed with…

Machine Learning · Statistics 2023-01-23 Ximena Fernández , Eugenio Borghini , Gabriel Mindlin , Pablo Groisman

Given a graph $G$, a subgraph $H$ is isometric if $d_H(u,v) = d_G(u,v)$ for every pair $u,v\in V(H)$, where $d$ is the distance function. A graph $G$ is distance preserving (dp) if it has an isometric subgraph of every possible order. A…

Discrete Mathematics · Computer Science 2018-05-28 Emad Zahedi , Jason P. Smith

Persistent homology, a technique from computational topology, has recently shown strong empirical performance in the context of graph classification. Being able to capture long range graph properties via higher-order topological features,…

Machine Learning · Computer Science 2024-12-20 Rubén Ballester , Bastian Rieck

Modern representation learning increasingly relies on unsupervised and self-supervised methods trained on large-scale unlabeled data. While these approaches achieve impressive generalization across tasks and domains, evaluating embedding…

Graphs are versatile tools for representing structured data. As a result, a variety of machine learning methods have been studied for graph data analysis. Although many such learning methods depend on the measurement of differences between…

Machine Learning · Statistics 2021-06-18 Tomoki Yoshida , Ichiro Takeuchi , Masayuki Karasuyama

We consider the problem of translating between irreducible closed sets and implicational bases in closure systems. To date, the complexity status of this problem is widely open, and it is further known to generalize the notorious hypergraph…

Data Structures and Algorithms · Computer Science 2025-11-04 Oscar Defrain , Arthur Ohana , Simon Vilmin

Geometric graphs appear in many real-world data sets, such as road networks, sensor networks, and molecules. We investigate the notion of distance between embedded graphs and present a metric to measure the distance between two geometric…

Data Structures and Algorithms · Computer Science 2024-07-15 Erin Wolf Chambers , Elizabeth Munch , Sarah Percival , Xinyi Wang

The use of topological persistence in contemporary data analysis has provided considerable impetus for investigations into the geometric and functional-analytic structure of the space of persistence modules. In this paper, we isolate a…

Algebraic Topology · Mathematics 2019-12-12 Peter Bubenik , Vin de Silva , Vidit Nanda

We consider the setting of Reeb graphs of piecewise linear functions and study distances between them that are stable, meaning that functions which are similar in the supremum norm ought to have similar Reeb graphs. We define an edit…

Algebraic Topology · Mathematics 2021-02-09 Ulrich Bauer , Claudia Landi , Facundo Memoli

In connection with machine arithmetic, we are interested in systems of constraints of the form x + k \leq y + k'. Over integers, the satisfiability problem for such systems is polynomial time. The problem becomes NP complete if we restrict…

Computational Complexity · Computer Science 2008-11-07 Nikolaj Bjørner , Andreas Blass , Yuri Gurevich , Madan Musuvathi
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