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Most nervous systems encode information about stimuli in the responding activity of large neuronal networks. This activity often manifests itself as dynamically coordinated sequences of action potentials. Since multiple electrode recordings…

Neurons and Cognition · Quantitative Biology 2011-11-09 Kristina Lisa Klinkner , Cosma Rohilla Shalizi , Marcelo F. Camperi

Sensory perception originates from the responses of sensory neurons, which react to a collection of sensory signals linked to various physical attributes of a singular perceptual object. Unraveling how the brain extracts perceptual…

Neurons and Cognition · Quantitative Biology 2025-10-27 Zhichao Zhu , Yang Qi , Wenlian Lu , Jianfeng Feng

Across the scientific literature, information measurement in the nervous system is posed as a problem of information processing internal to the brain by constructs such as neuronal populations, sensory surprise, or cognitive models.…

Neurons and Cognition · Quantitative Biology 2024-03-29 Bradly Alicea , Daniela Cialfi , Avery Lim , Jesse Parent

The activity of neurons within brain circuits has been ubiquitously reported to be correlated. The impact of these correlations on brain function has been extensively investigated. Correlations can in principle increase or decrease the…

Neurons and Cognition · Quantitative Biology 2025-07-24 Miguel Ibáñez-Berganza , Giulio Bondanelli , Stefano Panzeri

Humans and other animals base their decisions on noisy sensory input. Much work has therefore been devoted to understanding the computations that underly such decisions. The problem has been studied in a variety of tasks and with stimuli of…

Neurons and Cognition · Quantitative Biology 2015-03-05 Manisha Bhardwaj , Sam Carroll , Wei Ji Ma , Kresimir Josic

Most psychophysical experiments discard half the data collected. Specifically, experiments discard reaction time data, and use binary responses (e.g. yes/no) to measure performance. Here, Shannon's information theory is used to define…

Neurons and Cognition · Quantitative Biology 2021-12-14 James V Stone

We demonstrate that the information contained in the spike occurrence times of a population of neurons can be broken up into a series of terms, each of which reflect something about potential coding mechanisms. This is possible in the…

Biological Physics · Physics 2007-05-23 S. Panzeri , S. R. Schultz

Distributed computation in artificial life and complex systems is often described in terms of component operations on information: information storage, transfer and modification. Information modification remains poorly described however,…

Information Theory · Computer Science 2013-10-10 Joseph T. Lizier , Benjamin Flecker , Paul L. Williams

The mutual information between stimulus and spike-train response is commonly used to monitor neural coding efficiency, but neuronal computation broadly conceived requires more refined and targeted information measures of input-output joint…

Neurons and Cognition · Quantitative Biology 2015-04-21 Sarah E. Marzen , Michael R. DeWeese , James P. Crutchfield

We consider the information transmission problem in neurons and its possible implications for learning in neural networks. Our approach is based on recent developments in statistical physics and complexity science. Combining sensory…

Neurons and Cognition · Quantitative Biology 2025-09-30 Siddharth Kackar

We explore a few common models on how correlations affect information. The main model considered is the Shannon mutual information $I(S:R_1,\cdots, R_i)$ over distributions with marginals $P_{S,R_i}$ fixed for each $i$, with the analogy in…

Information Theory · Computer Science 2024-05-27 Ching-Peng Huang

This paper addresses two main challenges facing systems neuroscience today: understanding the nature and function of a) cortical feedback between sensory areas and b) correlated variability. Starting from the old idea of perception as…

Neurons and Cognition · Quantitative Biology 2015-11-20 Ralf M. Haefner , Pietro Berkes , József Fiser

A single neuron is categorized as"multisensory" if there is a statistically significant difference between the response evoked by an audio-visual stimulus combination and that evoked by the most effective of its components individually.…

Neurons and Cognition · Quantitative Biology 2016-08-09 Hans Colonius , Adele Diederich

Neural networks encode information through their collective spiking activity in response to external stimuli. This population response is noisy and strongly correlated, with complex interplay between correlations induced by the stimulus,…

Neurons and Cognition · Quantitative Biology 2022-11-28 Gabriel Mahuas , Olivier Marre , Thierry Mora , Ulisse Ferrari

To understand sensory coding, we must ask not only how much information neurons encode, but also what that information is about. This requires decomposing mutual information into contributions from individual stimuli and stimulus features:…

Neurons and Cognition · Quantitative Biology 2025-10-23 Steeve Laquitaine , Simone Azeglio , Carlo Paris , Ulisse Ferrari , Matthew Chalk

The Bayesian brain hypothesis has been a leading theory in understanding perceptual decision-making under uncertainty. While extensive psychophysical evidence supports the notion of the brain performing Bayesian computations, how…

Neurons and Cognition · Quantitative Biology 2026-03-05 Po-Chen Kuo , Edgar Y. Walker

Understanding a neural code requires knowledge both of the elementary symbols that transmit information and of the algorithm for translating these symbols into sensory signals or motor actions. We show that these questions can be separated:…

Biological Physics · Physics 2007-05-23 N. Brenner , S. P. Strong , R. Koberle , W. Bialek , R. de Ruyter van Steveninck

The introduction of the partial information decomposition generated a flurry of proposals for defining an intersection information that quantifies how much of "the same information" two or more random variables specify about a target random…

Information Theory · Computer Science 2015-06-11 Virgil Griffith , Edwin K. P. Chong , Ryan G. James , Christopher J. Ellison , James P. Crutchfield

To evaluate the nature of the neural code in the cerebral cortex, we have used a combination of theory and experiment to assess how information is represented in a realistic cortical population response. We have shown how a sensory stimulus…

Neurons and Cognition · Quantitative Biology 2008-03-28 L. C. Osborne , S. E. Palmer , S. G. Lisberger , W. Bialek

The nature of neural codes is central to neuroscience. Do neurons encode information through relatively slow changes in the emission rates of individual spikes (rate code), or by the precise timing of every spike (temporal codes)? Here we…

Quantitative Methods · Quantitative Biology 2018-03-08 Agnieszka Pregowska , Ehud Kaplan , Janusz Szczepanski
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