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One key task in virtual screening is to accurately predict the binding affinity ($\triangle$$G$) of protein-ligand complexes. Recently, deep learning (DL) has significantly increased the predicting accuracy of scoring functions due to the…

Quantitative Methods · Quantitative Biology 2022-06-28 Zechen Wang , Liangzhen Zheng , Yang Liu , Yuanyuan Qu , Yong-Qiang Li , Mingwen Zhao , Yuguang Mu , Weifeng Li

Thanks to rapidly evolving sequencing techniques, the amount of genomic data at our disposal is growing increasingly large. Determining the gene structure is a fundamental requirement to effectively interpret gene function and regulation.…

Genomics · Quantitative Biology 2017-11-28 Jasper Zuallaert , Mijung Kim , Yvan Saeys , Wesley De Neve

Convolutional neural network-based medical image classifiers have been shown to be especially susceptible to adversarial examples. Such instabilities are likely to be unacceptable in the future of automated diagnoses. Though statistical…

Computer Vision and Pattern Recognition · Computer Science 2022-10-27 Isaac Wasserman

Large Artificial Neural Network (ANN) models have demonstrated success in various domains, including general text and image generation, drug discovery, and protein-RNA (ribonucleic acid) binding tasks. However, these models typically demand…

Biomolecules · Quantitative Biology 2025-11-13 Stanislav Selitskiy

Over the past few years, question answering and information retrieval systems have become widely used. These systems attempt to find the answer of the asked questions from raw text sources. A component of these systems is Answer Selection…

Computation and Language · Computer Science 2019-11-13 Jamshid Mozafari , Mohammad Ali Nematbakhsh , Afsaneh Fatemi

Attention plays a critical role in human visual experience. Furthermore, it has recently been demonstrated that attention can also play an important role in the context of applying artificial neural networks to a variety of tasks from…

Computer Vision and Pattern Recognition · Computer Science 2017-02-14 Sergey Zagoruyko , Nikos Komodakis

The reliable segmentation of retinal vasculature can provide the means to diagnose and monitor the progression of a variety of diseases affecting the blood vessel network, including diabetes and hypertension. We leverage the power of…

Image and Video Processing · Electrical Eng. & Systems 2019-07-23 Ali Hatamizadeh , Hamid Hosseini , Zhengyuan Liu , Steven D. Schwartz , Demetri Terzopoulos

Support and resistance (SR) levels are central to technical analysis, guiding traders in entry, exit, and risk management. Despite widespread use, traditional SR identification methods often fail to adapt to the complexities of modern,…

Statistical Finance · Quantitative Finance 2025-07-04 Boris Kriuk , Logic Ng , Zarif Al Hossain

Non-coding RNAs are ubiquitous, but the discovery of new RNA gene sequences far outpaces research on their structure and functional interactions. We mine the evolutionary sequence record to derive precise information about function and…

Biomolecules · Quantitative Biology 2016-04-22 Caleb Weinreb , Adam J. Riesselman , John B. Ingraham , Torsten Gross , Chris Sander , Debora S. Marks

Convolutional neural networks have become a popular research in the field of finger vein recognition because of their powerful image feature representation. However, most researchers focus on improving the performance of the network by…

Computer Vision and Pattern Recognition · Computer Science 2022-02-15 Zhongxia Zhang , Mingwen Wang

This research addresses the challenge of characterizing the complexity and unpredictability of basins within various dynamical systems. The main focus is on demonstrating the efficiency of convolutional neural networks (CNNs) in this field.…

Machine Learning · Computer Science 2024-06-18 David Valle , Alexandre Wagemakers , Miguel A. F. Sanjuán

MicroRNAs (miRNAs) are short sequences of ribonucleic acids that control the expression of target messenger RNAs (mRNAs) by binding them. Robust prediction of miRNA-mRNA pairs is of utmost importance in deciphering gene regulations but has…

Machine Learning · Computer Science 2016-09-27 Byunghan Lee , Junghwan Baek , Seunghyun Park , Sungroh Yoon

Vehicle tracking task plays an important role on the internet of vehicles and intelligent transportation system. Beyond the traditional GPS sensor, the image sensor can capture different kinds of vehicles, analyze their driving situation…

Computer Vision and Pattern Recognition · Computer Science 2018-11-08 Xu Kang , Bin Song , Jie Guo , Xiaojiang Du , Mohsen Guizani

Pedestrian analysis plays a vital role in intelligent video surveillance and is a key component for security-centric computer vision systems. Despite that the convolutional neural networks are remarkable in learning discriminative features…

Computer Vision and Pattern Recognition · Computer Science 2017-09-29 Xihui Liu , Haiyu Zhao , Maoqing Tian , Lu Sheng , Jing Shao , Shuai Yi , Junjie Yan , Xiaogang Wang

Regression neural networks (NNs) are most commonly trained by minimizing the mean squared prediction error, which is highly sensitive to outliers and data contamination. Existing robust training methods for regression NNs are often limited…

Machine Learning · Statistics 2026-02-10 Abhik Ghosh , Suryasis Jana

Deep learning approaches have achieved highly accurate face recognition by training the models with very large face image datasets. Unlike the availability of large 2D face image datasets, there is a lack of large 3D face datasets available…

Computer Vision and Pattern Recognition · Computer Science 2021-12-23 Meng-Tzu Chiu , Hsun-Ying Cheng , Chien-Yi Wang , Shang-Hong Lai

Deep neural networks are composed of layers of parametrised linear operations intertwined with non linear activations. In basic models, such as the multi-layer perceptron, a linear layer operates on a simple input vector embedding of the…

Machine Learning · Computer Science 2020-03-06 Jean-Marc Andreoli

Deep learning has become a powerful tool in computational biology, revolutionising the analysis and interpretation of biological data over time. In our article review, we delve into various aspects of deep learning in computational biology.…

Convolutional Neural Networks (CNNs) have been consistently proved state-of-the-art results in image Super-Resolution (SR), representing an exceptional opportunity for the remote sensing field to extract further information and knowledge…

Image and Video Processing · Electrical Eng. & Systems 2020-11-02 Francesco Salvetti , Vittorio Mazzia , Aleem Khaliq , Marcello Chiaberge

Encoder-decoder-based recurrent neural network (RNN) has made significant progress in sequence-to-sequence learning tasks such as machine translation and conversational models. Recent works have shown the advantage of this type of network…

Machine Learning · Computer Science 2023-05-10 Jing Xiong , Pengyang Zhou , Alan Chen , Yu Zhang
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