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Building and analysing knowledge graphs (KGs) to aid drug discovery is a topical area of research. A salient feature of KGs is their ability to combine many heterogeneous data sources in a format that facilitates discovering connections.…

Computation and Language · Computer Science 2023-10-25 J. Charles G. Jeynes , Tim James , Matthew Corney

The process of matching patients with suitable clinical trials is essential for advancing medical research and providing optimal care. However, current approaches face challenges such as data standardization, ethical considerations, and a…

Computation and Language · Computer Science 2023-08-08 Jiayi Yuan , Ruixiang Tang , Xiaoqian Jiang , Xia Hu

Content analysis of scientific publications is a nontrivial task, but a useful and important one for scientific information services. In the Gutenberg era it was a domain of human experts; in the digital age many machine-based methods,…

Digital Libraries · Computer Science 2014-06-12 Ulf Schöneberg , Wolfram Sperber

Background We aim to use Natural Language Processing (NLP) to automate the extraction and classification of thyroid cancer risk factors from pathology reports. Methods We analyzed 1,410 surgical pathology reports from adult papillary…

Language documentation is inherently a time-intensive process; transcription, glossing, and corpus management consume a significant portion of documentary linguists' work. Advances in natural language processing can help to accelerate this…

Computation and Language · Computer Science 2018-12-14 Graham Neubig , Patrick Littell , Chian-Yu Chen , Jean Lee , Zirui Li , Yu-Hsiang Lin , Yuyan Zhang

Understanding the current research trends, problems, and their innovative solutions remains a bottleneck due to the ever-increasing volume of scientific articles. In this paper, we propose NLPExplorer, a completely automatic portal for…

Information Retrieval · Computer Science 2023-05-23 Monarch Parmar , Naman Jain , Pranjali Jain , P Jayakrishna Sahit , Soham Pachpande , Shruti Singh , Mayank Singh

The exponential growth of data generated on the Internet in the current information age is a driving force for the digital economy. Extraction of information is the major value in an accumulated big data. Big data dependency on statistical…

One of the most important challenges for modern search engines is to retrieve relevant web content based on user queries. In order to achieve this challenge, search engines have a module to rewrite user queries. That is why modern web…

Computation and Language · Computer Science 2023-10-23 Abdullah Can Algan , Emre Yürekli , Aykut Çayır

Healthcare domain generates a lot of unstructured and semi-structured text. Natural Language processing (NLP) has been used extensively to process this data. Deep Learning based NLP especially Large Language Models (LLMs) such as BERT have…

Computation and Language · Computer Science 2023-01-11 Kunal Suri , Atul Singh , Prakhar Mishra , Swapna Sourav Rout , Rajesh Sabapathy

This paper provides a critical review of the literature on deep learning applications in breast tumor diagnosis using ultrasound and mammography images. It also summarizes recent advances in computer-aided diagnosis (CAD) systems, which…

Image and Video Processing · Electrical Eng. & Systems 2020-10-05 Yuliana Jiménez-Gaona , María José Rodríguez-Álvarez , Vasudevan Lakshminarayanan

Domain experts often rely on most recent knowledge for apprehending and disseminating specific biological processes that help them design strategies for developing prevention and therapeutic decision-making in various disease scenarios. A…

Computation and Language · Computer Science 2023-11-21 Md. Rezaul Karim , Lina Molinas Comet , Md Shajalal , Oya Deniz Beyan , Dietrich Rebholz-Schuhmann , Stefan Decker

Accurate identification of breast cancer types plays a critical role in guiding treatment decisions and improving patient outcomes. This paper presents an artificial intelligence enabled tool designed to aid in the identification of breast…

Image and Video Processing · Electrical Eng. & Systems 2025-05-28 Neil Chaudhary , Zaynah Dhunny

The exponential increase in scientific literature and online information necessitates efficient methods for extracting knowledge from textual data. Natural language processing (NLP) plays a crucial role in addressing this challenge,…

Computation and Language · Computer Science 2025-10-22 Zhyar Rzgar K. Rostam , Gábor Kertész

State-of-the-art solutions for Natural Language Processing (NLP) are able to capture a broad range of contexts, like the sentence-level context or document-level context for short documents. But these solutions are still struggling when it…

Clinical Practice Guidelines (CPGs) for cancer diseases evolve rapidly due to new evidence generated by active research. Currently, CPGs are primarily published in a document format that is ill-suited for managing this developing knowledge.…

Artificial Intelligence · Computer Science 2023-07-21 Pralaypati Ta , Bhumika Gupta , Arihant Jain , Sneha Sree C , Arunima Sarkar , Keerthi Ram , Mohanasankar Sivaprakasam

Dementia is under-recognized in the community, under-diagnosed by healthcare professionals, and under-coded in claims data. Information on cognitive dysfunction, however, is often found in unstructured clinician notes within medical records…

[Abridged Abstract] Recent technological advances underscore labor market dynamics, yielding significant consequences for employment prospects and increasing job vacancy data across platforms and languages. Aggregating such data holds…

Computation and Language · Computer Science 2024-05-01 Mike Zhang

Since radiology reports needed for clinical practice and research are written and stored in free-text narrations, extraction of relative information for further analysis is difficult. In these circumstances, natural language processing…

Computation and Language · Computer Science 2022-09-27 Seyed Ali Reza Moezzi , Abdolrahman Ghaedi , Mojdeh Rahmanian , Seyedeh Zahra Mousavi , Ashkan Sami

Objective: Electronic health records (EHR) data are prone to missingness and errors. Previously, we devised an "enriched" chart review protocol where a "roadmap" of auxiliary diagnoses (anchors) was used to recover missing values in EHR…

Machine Learning · Computer Science 2025-10-07 Sarah C. Lotspeich , Abbey Collins , Brian J. Wells , Ashish K. Khanna , Joseph Rigdon , Lucy D'Agostino McGowan

This work presents a framework to classify and evaluate distinct research abstract texts which are focused on the description of processes and their applications. In this context, this paper proposes natural language processing algorithms…

Computation and Language · Computer Science 2021-12-06 Lucas G. O. Lopes , Thales M. A. Vieira , William W. M. Lira
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