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Using collision driven discrete molecular dynamics (DMD), we investigate the thermodynamics and dynamics of systems of 500 dumbbell molecules interacting by a purely repulsive ramp-like discretized potential, consisting of $n$ steps of…

Soft Condensed Matter · Physics 2009-11-11 Paulo A. Netz , Sergey Buldyrev , Marcia C. Barbosa , H. E. Stanley

An examination of the properties of many-electron conduction through spin-degenerate systems can lead to situations where increasing the bias voltage applied to the system is predicted to decrease the current flowing through it, for the…

Mesoscale and Nanoscale Physics · Physics 2009-11-13 Guy Cohen , Eran Rabani

Systems containing active components are intrinsically out of equilibrium, while binary mixtures reach their equilibrium configuration when complete phase separation is achieved. Active particles are found to stabilise non-equilibrium…

Soft Condensed Matter · Physics 2025-03-11 Javier Diaz , Ignacio Pagonabarraga

Motivated by recent experiments, we have studied transport behavior of coupled quantum dot systems in the Coulomb blockade regime using the master (rate) equation approach. We explore how electron-electron interactions in a donor-acceptor…

Mesoscale and Nanoscale Physics · Physics 2009-11-13 Prakash Parida , S Lakshmi , Swapan K Pati

Diffusive transport of small molecules within the internal structures of biological and synthetic material systems is complex because the crowded environment presents chemical and physical barriers to mobility. We explored this mobility…

Soft Condensed Matter · Physics 2020-09-29 Rajarshi Guha , Subhadip Ghosh , Darrell Velegol , Peter J. Butler , Ayusman Sen , Jennifer L. Ross

Many biological processes are supported by special molecules, called motor proteins or molecular motors, that transport cellular cargoes along linear protein filaments and can reversibly associate to their tracks. Stimulated by these…

Statistical Mechanics · Physics 2021-11-17 Akriti Jindal , Anatoly B. Kolomeisky , Arvind Kumar Gupta

We consider two coupled particles moving along a periodic substrate potential with negligible inertia effects (overdamped limit). Even when the particles are identical and the substrate spatially symmetric, a sinusoidal external driving of…

Statistical Mechanics · Physics 2012-07-04 David Speer , Ralf Eichhorn , Mykhaylo Evstigneev , Peter Reimann

The diffusion of a two-dimensional array of particles driven by a constant force in the presence of a periodic external potential exhibits a hierarchy of dynamical phase transitions when the driving force is varied. This behavior can be…

Statistical Mechanics · Physics 2009-10-30 O. M. Braun , T. Dauxois , M. V. Paliy , M. Peyrard

The flow of motor proteins on a filamental track is modelled within the the framework of lattice driven diffusive systems. Motors, considered as hopping particles, perform a highly biased asymmetric exclusion process when bound to the…

Statistical Mechanics · Physics 2007-05-23 M. Ebrahim Fouladvand , Modjtaba Salehi , Mostafa Yadegari

In this work we study a kinetic model of active particles with delayed dynamics, and its limit when the number of particles goes to infinity. This limit turns out to be related to delayed differential equations with random initial…

Analysis of PDEs · Mathematics 2020-06-17 Juan Pablo Pinasco , Mauro Rodriguez Cartabia , Nicolas Saintier

It is well known that a binary system of non-active disks that experience driving in opposite directions exhibits jammed, phase separated, disordered, and laning states. In active matter systems, such as a crowd of pedestrians, driving in…

Soft Condensed Matter · Physics 2018-08-15 C. Reichhardt , J. Thibault , S. Papanikolaou , C. J. O. Reichhardt

We consider the behavior of an interacting many particle system under slow external driving -- a many body generalization of the Landau-Zener paradigm. We find that a conspiracy of interactions and driving leads to physics profoundly…

Other Condensed Matter · Physics 2009-06-10 A. Altland , V. Gurarie , T. Kriecherbauer , A. Polkovnikov

Abridged abstract: Inert interactions between randomly moving entities and spatial disorder play a crucial role in quantifying the diffusive properties of a system. These interactions affect only the movement of the entities, and examples…

Statistical Mechanics · Physics 2022-09-20 Seeralan Sarvaharman , Luca Giuggioli

Transport of an inertial particle advected by a two-dimensional steady laminar flow is numerically investigated in the presences of a constant force and a periodic potential. Within particular parameter regimes this system exhibits absolute…

Soft Condensed Matter · Physics 2018-10-26 Bao-quan Ai , Wei-jing Zhu , Ya-feng He , Wei-rong Zhong

Swimming droplets are a class of active particles whose motility changes as a function of time due to shrinkage and self-avoidance of their trail. Here we combine experiments and theory to show that our non-Markovian droplet (NMD) model,…

Soft Condensed Matter · Physics 2024-05-17 Wenjun Chen , Adrien Izzet , Ruben Zakine , Eric Clément , Eric Vanden-Eijnden , Jasna Brujic

A prerequisite for isolating diseased cells requires a mechanism for effective mass-based separation. This objective, however, is generally rather challenging because typically no valid correlation exists between the size of the particles…

Statistical Mechanics · Physics 2019-03-27 Aleksandra Słapik , Jerzy Łuczka , Peter Hänggi , Jakub Spiechowicz

Natural phenomena frequently involve a very large number of interacting molecules moving in confined regions of space. Cellular transport by motor proteins is an example of such collective behavior. We derive a deterministic compartmental…

Subcellular Processes · Quantitative Biology 2017-11-01 Yoram Zarai , Michael Margaliot , Anatoly B. Kolomeisky

We study memory based random walk models to understand diffusive motion in crowded heterogeneous environment. The models considered are non-Markovian as the current move of the random walk models is determined by randomly selecting a move…

Statistical Mechanics · Physics 2018-08-01 Sabeeha Hasnain , Upendra Harbola , Pradipta Bandyopadhyay

We study driven particle systems with excluded volume interactions on a two-lane ladder with periodic boundaries, using Monte Carlo simulation, cluster mean-field theory, and numerical solution of the master equation. Particles in one lane…

Statistical Mechanics · Physics 2009-11-13 Ronald Dickman , Ronaldo R. Vidigal

We numerically investigate the diffusive behavior of active Brownian particles in a two-dimensional confined channel filled with soft obstacles, whose softness is controlled by a parameter $K$. Here, active particles are subjected to…

Soft Condensed Matter · Physics 2024-10-22 Ankit Gupta , P. S. Burada