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The subpath number of a graph G is defined as the total number of subpaths in G, and it is closely related to the number of subtrees, a well-studied topic in graph theory. This paper is a continuation of our previous paper [5], where we…

Discovering the underlying structures present in large real world graphs is a fundamental scientific problem. In this paper we show that a graph's clique tree can be used to extract a hyperedge replacement grammar. If we store an ordering…

Tree decompositions were developed by Robertson and Seymour. Since then algorithms have been developed to solve intractable problems efficiently for graphs of bounded treewidth. In this paper we extend tree decompositions to allow cycles to…

For a graph $G = (V, E)$, the $\gamma$-graph of $G$, denoted $G(\gamma) = (V(\gamma), E(\gamma))$, is the graph whose vertex set is the collection of minimum dominating sets, or $\gamma$-sets of $G$, and two $\gamma$-sets are adjacent in…

We study a fragmentation of the $\mathbf p$-trees of Camarri and Pitman [Elect. J. Probab., vol. 5, pp. 1--18, 2000]. We give exact correspondences between the $\mathbf p$-trees and trees which encode the fragmentation. We then use these…

Full Bayesian computational inference for model determination in undirected graphical models is currently restricted to decomposable graphs, except for problems of very small scale. In this paper we develop new, more efficient methodology…

The simple connected graphs may be classified by their cycle composition (number and lengths of cycles). This work derives the counting series of the simple connected graphs that have cycles of unrestricted number and length, but no…

A decision tree is commonly restricted to use a single hyperplane to split the covariate space at each of its internal nodes. It often requires a large number of nodes to achieve high accuracy, hurting its interpretability. In this paper,…

This is a new and short proof of the main theorem of classical structure tree theory. Namely, we show the existence of certain automorphism-invariant tree-decompositions of graphs based on the principle of removing finitely many edges. This…

We investigate characteristics of random split trees introduced by Devroye; split trees include for example binary search trees, $m$-ary search trees, quadtrees, median of $(2k+1)$-trees, simplex trees, tries and digital search trees. More…

We study the problem of learning a latent tree graphical model where samples are available only from a subset of variables. We propose two consistent and computationally efficient algorithms for learning minimal latent trees, that is, trees…

We consider the model of random trees introduced by Devroye [SIAM J. Comput. 28 (1999) 409-432]. The model encompasses many important randomized algorithms and data structures. The pieces of data (items) are stored in a randomized fashion…

An elimination tree for a connected graph $G$ is a rooted tree on the vertices of $G$ obtained by choosing a root $x$ and recursing on the connected components of $G-x$ to produce the subtrees of $x$. Elimination trees appear in many guises…

We prove that, for the edge ideal of a cactus graph, the arithmetical rank is bounded above by the sum of the number of cycles and the maximum height of its associated primes. The bound is sharp, but in many cases it can be improved.…

We study completely independent spanning trees (CIST), \textit{i.e.}, trees that are both edge-disjoint and internally vertex-disjoint, in split graphs. We establish a correspondence between the existence of CIST in a split graph and some…

For a connected graph, a vertex separator is a set of vertices whose removal creates at least two components. A vertex separator $S$ is minimal if it contains no other separator as a strict subset and a minimum vertex separator is a minimal…

We consider the problem of uniformly generating a spanning tree, of a connected undirected graph. This process is useful to compute statistics, namely for phylogenetic trees. We describe a Markov chain for producing these trees. For cycle…

A separation of a graph $G$ is a partition $(A_1, A_2, C)$ of $V(G)$ such that $A_1$ is anticomplete to $A_2$. A classic result from Robertson and Seymour's Graph Minors Project states that there is a correspondence between tree…

Let $F=\{H_1,...,H_k\}$ be a family of graphs. A graph $G$ with $m$ edges is called {\em totally $F$-decomposable} if for {\em every} linear combination of the form $\alpha_1 e(H_1) + ... + \alpha_k e(H_k) = m$ where each $\alpha_i$ is a…

We study the Decomposition Conjecture posed by Bar\'at and Thomassen (2006), which states that for every tree $T$ there exists a natural number $k_T$ such that, if $G$ is a $k_T$-edge-connected graph and $|E(T)|$ divides $|E(G)|$, then $G$…