Related papers: Models of Random Knots
Recent studies classify the topology of proteins by analysing the distribution of their projections using knotoids. The approximation of this distribution depends on the number of projection directions that are sampled. Here we investigate…
Virtual knot theory is a generalization of knot theory which is based on Gauss chord diagrams and link diagrams on closed oriented surfaces. A twisted knot is a generalization of a virtual knot, which corresponds to a link diagram on a…
We extend the list of known band structure topologies to include a large family of hyperbolic nodal links and knots, occurring both in conventional Hermitian systems where their stability relies on discrete symmetries, and in the…
The most tight conformations of prime knots are found with the use of the SONO algorithm. Their curvature and torsion profiles are calculated. Symmetry of the knots is analysed. Connections with the physics of polymers are discussed.
Proteins are linear molecular chains that often fold to function. The topology of folding is widely believed to define its properties and function, and knot theory has been applied to study protein structure and its implications. More that…
Statistical Topology emerged since topological aspects continue to gain importance in many areas of physics. It is most desirable to study topological invariants and their statistics in schematic models that facilitate the identification of…
Complex networks describe a wide range of systems in nature and society, much quoted examples including the cell, a network of chemicals linked by chemical reactions, or the Internet, a network of routers and computers connected by physical…
We construct a new type of geometric knot theory, plumbers' knots, and solve the problems of distinguishing and enumerating such knots at a fixed level of complexity. (v2) Minor edits, added theorem 3.18. (v3) Substantial revisions,…
We consider a class of random, weighted networks, obtained through a redefinition of patterns in an Hopfield-like model and, by performing percolation processes, we get information about topology and resilience properties of the networks…
By a fixed continuous map from a $3$-space to itself, a knot in the $3$-space may be mapped to another knot in the $3$-space. We analyze possible knot types of them. Then we map a knot repeatedly by a fixed continuous map and analyze…
We generalize the classical study of Alexander polynomials of smooth or PL locally-flat knots to PL knots that are not necessarily locally-flat. We introduce three families of generalized Alexander polynomials and study their properties.…
We examine computer experiments that can be performed to understand the dynamics of knots under self-repulsion. In the course of specific computer exploration we use the knot theory of rational knots and rational tangles to produce classes…
Two natural generalizations of knot theory are the study of spatial graphs and virtual knots. Our goal is to unify these two approaches into the study of virtual spatial graphs. This paper is a survey, and does not contain any new results.…
Random growth models are fundamental objects in modern probability theory, have given rise to new mathematics, and have numerous applications, including tumor growth and fluid flow in porous media. In this article, we introduce some of the…
Quantum mechanics is a successful theory that describes the behavior of photons, electrons, and other atomic- and molecular-scale objects. However, it is far from being well understood. In this paper, a new theory - knot physics for…
We introduce new skein invariants of links based on a procedure where we first apply the skein relation only to crossings of distinct components, so as to produce collections of unlinked knots. We then evaluate the resulting knots using a…
Virtual knots, defined by Kauffman, provide a natural generalization of classical knots. Most invariants of knots extend in a natural way to give invariants of virtual knots. In this paper we study the fundamental groups of virtual knots…
In this paper we constructed new model of plastic deformation. The knot theory was used to classify the plastic state.
Knots and links in 3-manifolds are studied by applying intersection invariants to singular concordances. The resulting link invariants generalize the Arf invariant, the mod 2 Sato-Levine invariants, and Milnor's triple linking numbers.…
Knot contact homology studies symplectic and contact geometric properties of conormals of knots in 3-manifolds using holomorphic curve techniques. It has connections to both mathematical and physical theories. On the mathematical side, we…