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The Sparse Grids Matlab Kit provides a Matlab implementation of sparse grids, and can be used for approximating high-dimensional functions and, in particular, for surrogate-model-based uncertainty quantification. It is lightweight,…

Mathematical Software · Computer Science 2023-10-11 Chiara Piazzola , Lorenzo Tamellini

Following an earthquake, it is vital to quickly evaluate the safety of the impacted areas. Damage detection systems, powered by computer vision and deep learning, can assist experts in this endeavor. However, the lack of extensive, labeled…

Computer Vision and Pattern Recognition · Computer Science 2025-05-30 Piercarlo Dondi , Alessio Gullotti , Michele Inchingolo , Ilaria Senaldi , Chiara Casarotti , Luca Lombardi , Marco Piastra

The computation of coefficients of amplitude systems for Turing bifurcations is a straightforward but sometimes elaborate task, in particular for 2D or 3D wave vector lattices. The Matlab tool ampsys automates such computations for two…

Pattern Formation and Solitons · Physics 2019-06-26 Hannes Uecker , Daniel Wetzel

In recent years there has been a considerable effort in optimising formal methods for application to code. This has been driven by tools such as CPAChecker, DIVINE, and CBMC. At the same time tools such as Uppaal have been massively…

Software Engineering · Computer Science 2021-08-09 Mitja Kulczynski , Axel Legay , Dirk Nowotka , Danny Bøgsted Poulsen

LLMs enable an exciting new class of data processing applications over large collections of unstructured documents. Several new programming frameworks have enabled developers to build these applications by composing them out of semantic…

Embedded Systems combine one or more processor cores with dedicated logic running on an ASIC or FPGA to meet design goals at reasonable cost. It is achieved by profiling the application with variety of aspects like performance, memory…

Performance · Computer Science 2013-12-12 Rajendra Patel , Arvind Rajwat

Variational quantum algorithms provide a direct, physics-based approach to protein structure prediction, but their accuracy is limited by the coarse resolution of the energy landscapes generated on current noisy devices. We propose a hybrid…

Emerging Technologies · Computer Science 2025-10-09 Yuqi Zhang , Yuxin Yang , Feixiong Chen , Cheng-Chang Lu , Nima Saeidi , Samuel L. Volchenboum , Junhan Zhao , Siwei Chen , Weiwen Jiang , Qiang Guan

Complex networks are relational data sets commonly represented as graphs. The analysis of their intricate structure is relevant to many areas of science and commerce, and data sets may reach sizes that require distributed storage and…

Distributed, Parallel, and Cluster Computing · Computer Science 2016-01-05 Jannis Koch , Christian L. Staudt , Maximilian Vogel , Henning Meyerhenke

Machine learning interatomic potentials (MLIPs) enable atomistic simulations with near ab initio accuracy at significantly reduced computational cost, but their broader adoption is often limited by fragmented tooling, limited scalability,…

Efficient Matlab codes in 2D and 3D have been proposed recently to assemble finite element matrices. In this paper we present simple, compact and efficient vectorized algorithms, which are variants of these codes, in arbitrary dimension,…

Mathematical Software · Computer Science 2015-06-22 François Cuvelier , Caroline Japhet , Gilles Scarella

Molecular docking that predicts the bound structures of small molecules (ligands) to their protein targets, plays a vital role in drug discovery. However, existing docking methods often face limitations: they either overlook crucial…

Quantitative Methods · Quantitative Biology 2025-02-24 Zizhuo Zhang , Lijun Wu , Kaiyuan Gao , Jiangchao Yao , Tao Qin , Bo Han

We present Qibo, a new open-source software for fast evaluation of quantum circuits and adiabatic evolution which takes full advantage of hardware accelerators. The growing interest in quantum computing and the recent developments of…

Large language models (LLMs) are increasingly applied to materials science questions, including literature comprehension, property prediction, materials discovery and alloy design. At the same time, a wide range of physics-based…

Materials Science · Physics 2025-12-17 Siyu Liu , Bo Hu , Beilin Ye , Jiamin Xu , David J. Srolovitz , Tongqi Wen

We introduce ABEL, the Adaptable Beginning-to-End Linac simulation framework developed for agile design studies of plasma-based accelerators and colliders. ABEL's modular architecture allows users to simulate particle acceleration across…

Accelerator Physics · Physics 2025-07-09 J. B. B. Chen , E. Adli , P. Drobniak , O. G. Finnerud , E. Hørlyk , D. Kalvik , C. A. Lindstrøm , F. Peña , K. Sjobak

Developing intuition about quantum information theory problems is difficult, as is verifying or ruling-out of hypothesis. We present a Matlab package intended to provide the QIT community with a new and powerful tool-set for quantum…

Quantum Physics · Physics 2007-08-06 Shai Machnes

We present a prototype of a software tool for exploration of multiple combinatorial optimisation problems in large real-world and synthetic complex networks. Our tool, called GraphCombEx (an acronym of Graph Combinatorial Explorer),…

Social and Information Networks · Computer Science 2018-05-15 David Chalupa , Ken A Hawick

FEMPAR is an open source object oriented Fortran200X scientific software library for the high-performance scalable simulation of complex multiphysics problems governed by partial differential equations at large scales, by exploiting…

Computational Engineering, Finance, and Science · Computer Science 2017-09-20 Santiago Badia , Alberto F. Martín , Javier Principe

This work presents AEQUAM (Area Efficient QUAntum eMulation), a toolchain that enables faster and more accessible quantum circuit verification. It consists of a compiler that translates OpenQASM 2.0 into RISC-like instructions, Cython…

Quantum Physics · Physics 2025-07-28 Lorenzo Lagostina , Deborah Volpe , Maurizio Zamboni , Giovanna Turvani

We present an easily accessible, object oriented code (written exclusively in Matlab) for adaptive finite element simulations in 2D. It features various refinement routines for triangular meshes as well as fully vectorized FEM ansatz spaces…

Numerical Analysis · Mathematics 2024-07-30 Michael Innerberger , Dirk Praetorius

Automated text scoring (ATS) tasks, such as automated essay scoring and readability assessment, are important educational applications of natural language processing. Due to their interpretability of models and predictions, traditional…

Computation and Language · Computer Science 2021-04-09 Hitoshi Manabe , Masato Hagiwara