Related papers: Random Monomial Ideals Macaulay2 Package
The R package optimall offers a collection of functions that efficiently streamline the design process of sampling in surveys ranging from simple to complex. The package's main functions allow users to interactively define and adjust strata…
We present MXtalTools, a flexible Python package for the data-driven modelling of molecular crystals, facilitating machine learning studies of the molecular solid state. MXtalTools comprises several classes of utilities: (1) synthesis,…
We describe the main functions of the Macaulay2 package Quasidegrees. The purpose of this package is to compute the quasidegree set of a finitely generated A-graded module presented as the cokernel of a monomial matrix. We provide examples…
For a polynomial ring S in n variables, we consider the natural action of the symmetric group S_n on S by permuting the variables. For an S_n-invariant monomial ideal I in S and j >= 0, we give an explicit recipe for computing the modules…
Numerical algebraic geometry is the field of computational mathematics concerning the numerical solution of polynomial systems of equations. Bertini, a popular software package for computational applications of this field, includes…
Markov random fields on two-dimensional lattices are behind many image analysis methodologies. mrf2d provides tools for statistical inference on a class of discrete stationary Markov random field models with pairwise interaction, which…
dtaianomaly is an open-source Python library for time series anomaly detection, designed to bridge the gap between academic research and real-world applications. Our goal is to (1) accelerate the development of novel state-of-the-art…
In this paper we study ideals generated by quite general sets of 2-minors of an $m \times n$-matrix of indeterminates. The sets of 2-minors are defined by collections of cells and include 2-sided ladders. For convex collections of cells it…
Consider the set of solutions to a system of polynomial equations in many variables. An algebraic manifold is an open submanifold of such a set. We introduce a new method for computing integrals and sampling from distributions on algebraic…
One of the contemporary challenges in anomaly detection is the ability to detect, and differentiate between, both point and collective anomalies within a data sequence or time series. The anomaly package has been developed to provide users…
We describe a recently revived version of the software package SubalgberaBases, which is distributed in the Macaulay2 computer algebra system. The package allows the user to compute and manipulate subagebra bases -- which are also known as…
We give a structure theorem for Cohen Macaulay monomial ideals of codimension 2, and describe all possible relation matrices of such ideals. In case that the ideal has a linear resolution, the relation matrices can be identified with the…
Polyomino ideals, defined as the ideals generated by the inner $2$-minors of a polyomino, are a class of binomial ideals whose algebraic properties are closely related to the combinatorial structure of the underlying polyomino. We provide a…
Background: Current nomogram can only be created for regression algorithm. Providing nomogram for any machine learning (ML) algorithms may accelerate model deployment in clinical settings or improve model availability. We developed an R…
We describe the typical homological properties of monomial ideals defined by random generating sets. We show that, under mild assumptions, random monomial ideals (RMI's) will almost always have resolutions of maximal length; that is, the…
We survey some general-purpose symbolic software packages that implement algorithms from enumerative and analytic combinatorics. Software for the following areas is covered: basic combinatorial objects, symbolic combinatorics, P\'olya…
We introduce the R package ContaminatedMixt, conceived to disseminate the use of mixtures of multivariate contaminated normal distributions as a tool for robust clustering and classification under the common assumption of elliptically…
Extending the notion of indispensable binomials of a toric ideal, we define indispensable monomials of a toric ideal and establish some of their properties. They are useful for searching indispensable binomials of a toric ideal and for…
In recent years, the combinatorial properties of monomials ideals and binomial ideals have been widely studied. In particular, combinatorial interpretations of free resolution algorithms have been given in both cases. In this present work,…
The package \texttt{NumericalCertification} implements methods for certifying numerical approximations of solutions for a given system of polynomial equations. For certifying regular solutions, the package implements Smale's $\alpha$-theory…