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Related papers: Prospective Detection of Outbreaks

200 papers

This study presents a method to discover an outbreak of an infectious disease in a region for which data are missing, but which is at work as a disease spreader. Node discovery for the spread of an infectious disease is defined as…

Artificial Intelligence · Computer Science 2011-10-18 Yoshiharu Maeno

The scan statistic sets the benchmark for spatio-temporal surveillance methods with its popularity. In its simplest form it scans the target area and time to find regions with disease count higher than expected. If the shape and size of the…

Applications · Statistics 2013-10-01 Ross Sparks , Adrien Ickowicz

Stochasticity and spatial heterogeneity are of great interest recently in studying the spread of an infectious disease. The presented method solves an inverse problem to discover the effectively decisive topology of a heterogeneous network…

Artificial Intelligence · Computer Science 2015-03-13 Yoshiharu Maeno

Responding to disease outbreaks requires close surveillance of their trajectories, but outbreak detection is hindered by the high noise in epidemic time series. Aggregating information across data sources has shown great denoising ability…

Machine Learning · Computer Science 2025-11-11 Ruiqi Lyu , Alistair Turcan , Bryan Wilder

In recent days different types of surveillance data are becoming available for public health reasons. In most cases several variables are monitored and events of different types are reported. As the amount of surveillance data increases,…

Applications · Statistics 2019-09-16 Xanthi Pedeli , Dimitris Karlis

Containment of epidemic outbreaks entails great societal and economic costs. Cost-effective containment strategies rely on efficiently identifying infected individuals, making the best possible use of the available testing resources.…

Populations and Evolution · Quantitative Biology 2020-12-01 Laura Natali , Saga Helgadottir , Onofrio M. Marago , Giovanni Volpe

In this paper, we explore whether the infection-rate of a disease can serve as a robust monitoring variable in epidemiological surveillance algorithms. The infection-rate is dependent on population mixing patterns that do not vary…

Applications · Statistics 2024-07-17 Wyatt Bridgman , Cosmin Safta , Jaideep Ray

Short-time human travel behaviour can be described by a power law with respect to distance. We incorporate this information in space-time models for infectious disease surveillance data to better capture the dynamics of disease spread. Two…

Methodology · Statistics 2014-11-25 Sebastian Meyer , Leonhard Held

Public health surveillance aims at lessening disease burden, e.g., in case of infectious diseases by timely recognizing emerging outbreaks. Seen from a statistical perspective, this implies the use of appropriate methods for monitoring time…

Computation · Statistics 2017-01-26 Salmon Maëlle , Schumacher Dirk , Höhle Michael

The emergence of novel infectious agents presents challenges to statistical models of disease transmission. These challenges arise from limited, poor-quality data and an incomplete understanding of the agent. Moreover, outbreaks manifest…

Methodology · Statistics 2024-03-20 Jiasheng Shi , Jeffrey S. Morris , David M. Rubin , Jing Huang

An expectation-based scan statistic is proposed for the prospective monitoring of spatio-temporal count data with an excess of zeros. The method, which is based on an outbreak model for the zero-inflated Poisson distribution, is shown to be…

Methodology · Statistics 2017-12-27 Benjamin Allévius , Michael Höhle

In today's world,the risk of emerging and re-emerging epidemics have increased.The recent advancement in healthcare technology has made it possible to predict an epidemic outbreak in a region.Early prediction of an epidemic outbreak greatly…

Machine Learning · Computer Science 2024-09-01 Akshara Pramod , JS Abhishek , Suganthi K

Early, reliable detection of disease outbreaks is a critical problem today. This paper reports an investigation of the use of causal Bayesian networks to model spatio-temporal patterns of a non-contagious disease (respiratory anthrax…

Applications · Statistics 2012-07-19 Gregory F. Cooper , Denver Dash , John Levander , Weng-Keen Wong , William Hogan , Michael Wagner

The primary tool for predicting infectious disease spread and intervention effectiveness is the mass action Susceptible-Infected-Recovered model of Kermack and McKendrick. Its usefulness derives largely from its conceptual and mathematical…

Populations and Evolution · Quantitative Biology 2015-09-03 Joel C. Miller , Anja C. Slim , Erik M. Volz

The advent of the coronavirus pandemic has sparked the interest in predictive models capable of forecasting virus-spreading, especially for boosting and supporting decision-making processes. In this paper, we will outline the main Deep…

Epidemiologists aiming to model the dynamics of global events face a significant challenge in identifying the factors linked with anomalies such as disease outbreaks. In this paper, we present a novel method for identifying the most…

Machine Learning · Computer Science 2021-09-20 Aboli Marathe , Saloni Parekh , Harsh Sakhrani

This paper is concerned with the application of recent statistical advances to inference of infectious disease dynamics. We describe the fitting of a class of epidemic models using Hamiltonian Monte Carlo and Variational Inference as…

Forecasting the occurrence and absence of novel disease outbreaks is essential for disease management. Here, we develop a general model, with no real-world training data, that accurately forecasts outbreaks and non-outbreaks. We propose a…

Machine Learning · Computer Science 2024-04-16 Shan Gao , Amit K. Chakraborty , Russell Greiner , Mark A. Lewis , Hao Wang

We define data analyses to monitor a change in R, the average number of secondary cases caused by a typical infected individual. The input dataset consists of incident cases partitioned into outbreaks, each initiated from a single index…

Populations and Evolution · Quantitative Biology 2016-04-27 Pavel Polyakov , Romulus Breban

We present a general framework for adaptive allocation of viral tests in social contact networks. We pose and solve several complementary problems. First, we consider the design of a social sensing system whose objective is the early…

Social and Information Networks · Computer Science 2020-11-05 Pau Batlle , Joan Bruna , Carlos Fernandez-Granda , Victor M. Preciado