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In the continuum, close connections exist between mean curvature flow, the Allen-Cahn (AC) partial differential equation, and the Merriman-Bence-Osher (MBO) threshold dynamics scheme. Graph analogues of these processes have recently seen a…

Analysis of PDEs · Mathematics 2019-07-11 Yves van Gennip , Nestor Guillen , Braxton Osting , Andrea L. Bertozzi

An emerging technique in image segmentation, semi-supervised learning, and general classification problems concerns the use of phase-separating flows defined on finite graphs. This technique was pioneered in Bertozzi and Flenner (2012),…

Analysis of PDEs · Mathematics 2020-05-28 Jeremy Budd , Yves van Gennip

In molecular and biological sciences, experiments are expensive, time-consuming, and often subject to ethical constraints. Consequently, one often faces the challenging task of predicting desirable properties from small data sets or…

Machine Learning · Computer Science 2023-01-09 Nicole Hayes , Ekaterina Merkurjev , Guo-Wei Wei

In recent years there has been an emerging interest in PDE-like flows defined on finite graphs, with applications in clustering and image segmentation. In particular for image segmentation and semi-supervised learning Bertozzi and Flenner…

Analysis of PDEs · Mathematics 2020-10-20 Jeremy Budd , Yves van Gennip

We introduce a principled method for the signed clustering problem, where the goal is to partition a graph whose edge weights take both positive and negative values, such that edges within the same cluster are mostly positive, while edges…

Social and Information Networks · Computer Science 2019-10-10 Mihai Cucuringu , Andrea Pizzoferrato , Yves van Gennip

Graph-based machine learning has seen an increased interest over the last decade with many connections to other fields of applied mathematics. Learning based on partial differential equations, such as the phase-field Allen-Cahn equation,…

Numerical Analysis · Mathematics 2025-12-23 Chiara Faccio , Margherita Porcelli , Francesco Rinaldi , Martin Stoll

The Max-Cut problem is a well known combinatorial optimization problem. In this paper we describe a fast approximation method. Given a graph G, we want to find a cut whose size is maximal among all possible cuts. A cut is a partition of the…

Analysis of PDEs · Mathematics 2019-07-11 Blaine Keetch , Yves van Gennip

This paper introduces a semi-discrete implicit Euler (SDIE) scheme for the Allen-Cahn equation (ACE) with fidelity forcing on graphs. Bertozzi and Flenner (2012) pioneered the use of this differential equation as a method for graph…

Numerical Analysis · Mathematics 2021-04-08 Jeremy Budd , Yves van Gennip , Jonas Latz

The Massively Parallel Computation (MPC) model is an emerging model which distills core aspects of distributed and parallel computation. It has been developed as a tool to solve (typically graph) problems in systems where the input is…

Data Structures and Algorithms · Computer Science 2020-02-20 Artur Czumaj , Peter Davies , Merav Parter

Boolean-width is a recently introduced graph parameter. Many problems are fixed parameter tractable when parametrized by boolean-width, for instance "Minimum Weighted Dominating Set" (MWDS) problem can be solved in $O^*(2^{3k})$ time given…

Discrete Mathematics · Computer Science 2011-07-11 Rémy Belmonte , Martin Vatshelle

We address the problem of optimizing over functions defined on node subsets in a graph. The optimization of such functions is often a non-trivial task given their combinatorial, black-box and expensive-to-evaluate nature. Although various…

Machine Learning · Computer Science 2025-01-07 Huidong Liang , Xingchen Wan , Xiaowen Dong

The focus of this paper is two fold. Firstly, we present a logical approach to graph modification problems such as minimum node deletion, edge deletion, edge augmentation problems by expressing them as an expression in first order (FO)…

Logic in Computer Science · Computer Science 2017-11-09 Kona Harshita , Sounaka Mishra , Renjith. P , N. Sadagopan

Bayesian optimization (BO) is a powerful framework for optimizing expensive black-box objectives, yet extending it to graph-structured domains remains challenging due to the discrete and combinatorial nature of graphs. Existing approaches…

Machine Learning · Computer Science 2025-11-12 Shu Hong , Yongsheng Mei , Mahdi Imani , Tian Lan

Bayesian optimization (BO) is an efficient framework for solving black-box optimization problems with expensive function evaluations. This paper addresses the BO problem setting for combinatorial spaces (e.g., sequences and graphs) that…

Machine Learning · Computer Science 2022-02-07 Aryan Deshwal , Syrine Belakaria , Janardhan Rao Doppa

Quadratic Unconstrained Binary Optimization (QUBO) is a generic technique to model various NP-hard Combinatorial Optimization problems (CO) in the form of binary variables. Ising Hamiltonian is used to model the energy function of a system.…

Machine Learning · Computer Science 2023-12-13 Redwan Ahmed Rizvee , Raheeb Hassan , Md. Mosaddek Khan

A range of quantum algorithms, especially those leveraging variational parameterization and circuit-based optimization, are being studied as alternatives for solving classically intractable combinatorial optimization problems (COPs).…

Quantum Physics · Physics 2025-06-18 Monit Sharma , Hoong Chuin Lau

Bayesian optimization (BO) is a popular technique for sequential black-box function optimization, with applications including parameter tuning, robotics, environmental monitoring, and more. One of the most important challenges in BO is the…

Machine Learning · Computer Science 2018-03-29 Paul Rolland , Jonathan Scarlett , Ilija Bogunovic , Volkan Cevher

Data sets with imbalanced class sizes, where one class size is much smaller than that of others, occur exceedingly often in many applications, including those with biological foundations, such as disease diagnosis and drug discovery.…

Machine Learning · Computer Science 2024-09-05 Nicole Hayes , Ekaterina Merkurjev , Guo-Wei Wei

Gas transport and other complex real-world challenges often require solving and controlling partial differential equations (PDEs) defined on graph structures, which typically demand substantial memory and computational resources. The Random…

Numerical Analysis · Mathematics 2025-06-16 Martín Hernández , Enrique Zuazua

We improve the running time of the general algorithmic technique known as Baker's approach (1994) on H-minor-free graphs from O(n^{f(|H|)}) to O(f(|H|) n^{O(1)}). The numerous applications include e.g. a 2-approximation for coloring and…

Data Structures and Algorithms · Computer Science 2015-05-18 Siamak Tazari
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