English
Related papers

Related papers: Invasion moving boundary problem for a biofilm rea…

200 papers

A free boundary value problem related to the genesis of multispecies granular biofilms is presented. The granular biofilm is modelled as a spherical free boundary domain with radial symmetry. The proposed model is conceived in the framework…

Analysis of PDEs · Mathematics 2023-01-31 F. Russo , M. R. Mattei , A. Tenore , B. D'Acunto , V. Luongo , L. Frunzo

The dynamics of biofilm lifecycle are deeply influenced by the surrounding environment and the interactions between sessile and planktonic phenotypes. Bacterial biofilms typically develop in three distinct stages: attachment of cells to a…

Analysis of PDEs · Mathematics 2021-07-07 B. D'Acunto , L. Frunzo , V. Luongo , M. R. Mattei , A. Tenore

This work presents the existence and uniqueness of solution to a free boundary value problem related to biofilm growth. The problem consists of a system of nonlinear hyperbolic partial differential equations governing the microbial species…

Analysis of PDEs · Mathematics 2025-03-26 Dieudonné Zirhumanana Balike , Luigi Frunzo , Maria Rosaria Mattei , Fabiana Russo

A mathematical model for emerging contaminants sorption in multispecies biofilms, based on a continuum approach and mass conservation principles is presented. Diffusion of contaminants within the biofilm is described using a…

Cell Behavior · Quantitative Biology 2017-06-15 Luigi Frunzo

A multiscale mathematical model is presented to describe the de novo granulation and the evolution of multispecies granular biofilms within a continuous reactor. The granule is modelled as a spherical free boundary domain with radial…

Populations and Evolution · Quantitative Biology 2022-02-02 A. Tenore , F. Russo , M. R. Mattei , B. D'Acunto , G. Collins , L. Frunzo

Microfiltration technology is a widely used engineering strategy for fresh water production and water treatment. The major concern in many applications is the formation of a biological fouling layer leading to increased hydraulic resistance…

Biological Physics · Physics 2021-04-12 V. Luongo , M. R. Mattei , L. Frunzo , B. D'Acunto , K. Gupta , S. Chellam , N. G. Cogan

We present the stability analysis of two free boundary problems arising in biofilm modelling. The first, introduced in the 1980s by Wanner and Gujer, is related to the competition between autotrophic and heterotrophic bacteria in a biofilm…

Analysis of PDEs · Mathematics 2025-03-26 Dieudonné Zirhumanana Balike , Maria Rosaria Mattei , Luigi Frunzo

In this paper a reduced one-dimensional moving boundary model is studied that describes the evolution of a biofilm driven by the presence of a reaction limiting substrate. Global well-posedness is established for the resulting parabolic…

Analysis of PDEs · Mathematics 2025-05-30 Patrick Guidotti , Christoph Walker

We propose a computational framework to study the growth and spread of bacterial biofilms on interfaces, as well as the action of antibiotics on them. Bacterial membranes are represented by boundaries immersed in a fluid matrix and subject…

Cell Behavior · Quantitative Biology 2022-01-11 Ana Carpio , Rafael Gonzalez-Albaladejo

Active nematics are the nonequilibrium analog of passive liquid crystals in which anisotropic units consume free energy to drive emergent behavior. Similar to liquid crystal (LC) molecules in displays, ordering and dynamics in active…

Quantitative Methods · Quantitative Biology 2022-10-10 Japinder Nijjer , Mrityunjay Kothari , Changhao Li , Thomas Henzel , Qiuting Zhang , Jung-Shen B. Tai , Shuang Zhou , Sulin Zhang , Tal Cohen , Jing Yan

In this paper we consider the diffusive competition model with free boundary in the heterogeneous time-periodic environment, in which the variable intrinsic growth rates of invasive and native species may change signs and be "very negative"…

Analysis of PDEs · Mathematics 2015-04-28 Mingxin Wang

We perform mathematical anaysis of the biofilm development process. A model describing biomass growth is proposed: It arises from coupling three parabolic nonlinear equations: a biomass equation with degenerate and singular diffusion, a…

Analysis of PDEs · Mathematics 2017-03-14 Maria Gokieli , Nobuyuki Kenmochi , Marek Niezgódka

We study a free boundary problem for a parabolic partial differential equation in which the solution is coupled to the moving boundary through an integral constraint. The problem arises as the hydrodynamic limit of an interacting particle…

Analysis of PDEs · Mathematics 2020-05-20 Julien Berestycki , Éric Brunet , James Nolen , Sarah Penington

In this work we consider how surface-adherent bacterial biofilm communities respond in flowing systems. We simulate the fluid-structure interaction and separation process using the immersed boundary method. In these simulations we model and…

Numerical Analysis · Mathematics 2013-02-18 Jason F. Hammond , Elizabeth J. Stewart , John G. Younger , Michael J. Solomon , David M. Bortz

We consider a free boundary model of epithelial cell migration with logistic growth and nonlinear diffusion induced by mechanical interactions. Using numerical simulations, phase plane and perturbation analysis, we find and analyse…

Pattern Formation and Solitons · Physics 2020-10-05 Ryan J Murphy , Pascal R Buenzli , Ruth E Baker , Matthew J Simpson

We prove an existence result for a free boundary problem inspired by the modelization of accretive growth. The growth process is formulated through a level-set approach, leading to a boundary-value problem for a Hamilton-Jacobi equation…

Analysis of PDEs · Mathematics 2026-02-17 Ulisse Stefanelli

In this article we investigate two free boundary problems for a Lotka-Volterra competition system in a higher space dimension with sign-changing coefficients. One may be viewed as describing how two competing species invade if they occupy…

Analysis of PDEs · Mathematics 2015-04-13 Yonggang Zhao , Mingxin Wang

Biofilm infections on medical implants are difficult to eradicate because insufficient nutrient availability promotes antibiotic-tolerant persister cells that survive treatment and reseed growth. Existing mathematical models usually omit…

Populations and Evolution · Quantitative Biology 2025-09-23 Parna Mandal , Nigel J. Mottram , Sean McGinty

Biological active materials such as bacterial biofilms and eukaryotic cells thrive in confined micro-spaces. Here, we show through numerical simulations that confinement can serve as a mechanical guidance to achieve distinct modes of…

Soft Condensed Matter · Physics 2019-08-05 Felix Kempf , Romain Mueller , Erwin Frey , Julia M. Yeomans , Amin Doostmohammadi

We investigate a mathematical model for a bacterial population in a continuously stirred tank reactor with wall attachment. The model couples a free-boundary value problem for substrate diffusion in the one-dimensional biofilm with a system…

Analysis of PDEs · Mathematics 2026-03-12 Katerina Nik , Christoph Walker
‹ Prev 1 2 3 10 Next ›