English
Related papers

Related papers: Breaking the spell of nestedness

200 papers

Living organisms, ecosystems, and social systems are examples of complex systems in which robustness against inclusion of new elements is an essential feature. A recently proposed simple model has revealed a general mechanism by which such…

Adaptation and Self-Organizing Systems · Physics 2018-01-24 Fumiko Ogushi , János Kertész , Kimmo Kaski , Takashi Shimada

Identifying and explaining the structure of complex networks at different scales has become an important problem across disciplines. At the mesoscale, modular architecture has attracted most of the attention. At the macroscale, other…

Physics and Society · Physics 2018-11-09 María J. Palazzi , Javier Borge-Holthoefer , Claudio Tessone , Albert Solé-Ribalta

The complexity of many biological, social and technological systems stems from the richness of the interactions among their units. Over the past decades, a great variety of complex systems has been successfully described as networks whose…

Mutualisms are key for structuring ecological communities, but they are sensitive to environmental change and fluctuations in population size. Consequently, how mutualisms achieve stability remains an open question in ecological theory.…

Populations and Evolution · Quantitative Biology 2026-05-08 Matheus Bongestab , David Pinto-Ramos , Ricardo Martinez-Garcia

Social scientists have long appreciated that relationships between individuals cannot be described from observing a single domain, and that the structure across domains of interaction can have important effects on outcomes of interest…

General Economics · Economics 2020-05-28 Curtis Atkisson , Piotr J. Górski , Matthew O. Jackson , Janusz A. Hołyst , Raissa M. D'Souza

Nestedness has traditionally been used to detect assembly patterns in meta-communities and networks of interacting species. Attempts have also been made to uncover nested structures in international trade, typically represented as bipartite…

We consider a multi-species community modelled as a complex network of populations, where the links are given by a random asymmetric matrix J, with fraction 1-C of zero entries, where C reflects the over-all connectivity of the system. The…

Biological Physics · Physics 2015-12-31 Anshul Choudhary , Sudeshna Sinha

All types of networks arise as intricate combinations of dyadic building blocks formed by pairs of vertices. In directed networks, the dyadic patterns are entirely determined by reciprocity, i.e. the tendency to form, or to avoid, mutual…

Data Analysis, Statistics and Probability · Physics 2014-01-14 Tiziano Squartini , Francesco Picciolo , Franco Ruzzenenti , Diego Garlaschelli

On a global level, ecological communities are being perturbed at an unprecedented rate by human activities and environmental instabilities. Yet, we understand little about what factors facilitate or impede long-term persistence of these…

Populations and Evolution · Quantitative Biology 2024-10-24 Johannes Nauta , Manlio De Domenico

In contrast to dyadic interactions, higher-order interactions may contain one another, with subgroups naturally embedded within larger groups. These containment patterns arise empirically in ecology, sociology, computer science and the…

A recent paper by James et al. finds that mutualistic interactions decrease the biodiversity of model ecosystems. However, this result can be reverted if we consider ecological trade-offs and choose parameters suitable for sparse…

Populations and Evolution · Quantitative Biology 2014-09-08 Alberto Pascual-García , Antonio Ferrera , Ugo Bastolla

Investigating relation between various structural patterns found in real-world networks and stability of underlying systems is crucial to understand importance and evolutionary origin of such patterns. We evolve multiplex networks,…

Adaptation and Self-Organizing Systems · Physics 2017-02-22 Sanjiv K. Dwivedi , Sarika Jalan

We present a model that takes into account the coupling between evolutionary game dynamics and social influence. Importantly, social influence and game dynamics take place in different domains, which we model as different layers of a…

Physics and Society · Physics 2017-02-22 Roberta Amato , Albert Díaz-Guilera , Kaj-Kolja Kleineberg

The emergence of collective cooperation in competitive environments is a well-known phenomenon in biology, economics, and social systems. While most evolutionary game models focus on the evolution of strategies for a fixed game, how…

Physics and Society · Physics 2024-08-01 Onkar Sadekar , Andrea Civilini , Jesús Gómez-Gardeñes , Vito Latora , Federico Battiston

(Bi)multi-partite interaction patterns are commonly observed in real world systems which have inhibitory and excitatory couplings. We hypothesize these structural interaction pattern to be stable and naturally arising in the course of…

Physics and Society · Physics 2016-01-20 Sarika Jalan , Sanjiv K. Dwivedi

Forty years ago, Robert May questioned a central belief in ecology by proving that sufficiently large or complex ecological networks have probability of persisting close to zero. To prove this point, he analyzed large networks in which…

Populations and Evolution · Quantitative Biology 2015-05-28 Stefano Allesina , Si Tang

There is no much doubt that biotic interactions shape community assembly and ultimately the spatial co-variations between species. There is a hope that the signal of these biotic interactions can be observed and retrieved by investigating…

Machine Learning · Statistics 2025-07-15 Sara Si-Moussi , Esther Galbrun , Mickael Hedde , Giovanni Poggiato , Matthias Rohr , Wilfried Thuiller

Collaboration networks are studied as an example of growing bipartite networks. These have been previously observed to have structure such as positive correlations between nearest-neighbour degrees. However, a detailed understanding of the…

Physics and Society · Physics 2009-11-11 Matti Peltomaki , Mikko Alava

Disordered systems theory provides powerful tools to analyze the generic behaviors of highdimensional systems, such as species-rich ecological communities or neural networks. By assuming randomness in their interactions, universality…

Populations and Evolution · Quantitative Biology 2025-03-20 Juan Giral Martínez

Cooperation among unrelated individuals is frequently observed in social groups when their members combine efforts and resources to obtain a shared benefit that is unachievable by an individual alone. However, understanding why cooperation…