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We present an efficient way to solve the Bethe-Salpeter equation (BSE), a model for the computation of absorption spectra in molecules and solids that includes electron-hole excitations. Standard approaches to construct and diagonalize the…

Computational Physics · Physics 2018-02-01 Wei Hu , Meiyue Shao , Andrea Cepellotti , Felipe H. da Jornada , Lin Lin , Kyle Thicke , Chao Yang , Steven G. Louie

We investigate the use of interpolative separable density fitting (ISDF) as a means to reduce the memory bottleneck in auxiliary field quantum Monte Carlo (AFQMC) simulations of real materials in Gaussian basis sets. We find that ISDF can…

Chemical Physics · Physics 2018-12-27 Fionn D Malone , Shuai Zhang , Miguel A. Morales

This paper presents a new approach to obtaining nearly complete coverage paths (CP) with low overlapping on 3D general surfaces using mesh models. The CP is obtained by segmenting the mesh model into a given number of clusters using…

Robotics · Computer Science 2023-10-24 Van-Thach Do , Quang-Cuong Pham

A new approach for simulating flows over complex geometries is developed by introducing an accurate virtual interpolation point scheme as well as a virtual local stencil approach. The present method is based on the concept of point…

Numerical Analysis · Mathematics 2014-02-05 Seong-Kwan Park , Gahyung Jo , Hi Jun Choe

Photon counting detectors (PCDs) offer promising advancements in computed tomography (CT) imaging by enabling the quantification and 3D imaging of contrast agents and tissue types through multi-energy projections. However, the accuracy of…

Medical Physics · Physics 2023-10-18 Juan C. R. Luna , Mini Das

Hybrid density functional theory (DFT) remains intractable for large periodic systems due to the demanding computational cost of exact exchange. We apply the tensor hypercontraction (THC) (or interpolative separable density fitting)…

Computational Physics · Physics 2023-10-13 Adam Rettig , Joonho Lee , Martin Head-Gordon

While Marching Cubes (MC) and Marching Tetrahedra (MTet) are widely adopted in 3D reconstruction pipelines due to their simplicity and efficiency, their differentiable variants remain suboptimal for mesh extraction. This often limits the…

Computational Geometry · Computer Science 2026-01-21 Wylliam Cantin Charawi , Adrien Gruson , Jane Wu , Christian Desrosiers , Diego Thomas

In data analysis, there continues to be a need for interpretable dimensionality reduction methods whereby instrinic meaning associated with the data is retained in the reduced space. Standard approaches such as Principal Component Analysis…

Numerical Analysis · Mathematics 2024-02-13 Maria Emelianenko , Guy B. Oldaker

Nonlocal kinetic energy density functionals (KEDFs) with density-dependent kernels are currently the most accurate functionals available for orbital-free density functional theory (OF-DFT) calculations. However, despite advances in…

Materials Science · Physics 2024-12-05 Yongshuo Chen , Cheng Ma , Boning Cui , Tian Cui , Wenhui Mi , Qiang Xu , Yanchao Wang , Yanming Ma

Currently, grid and glass methods are the two most popular choices to generate uniform particle distributions (i.e., pre-initial conditions) for cosmological $N$-body simulations. In this article, we introduce an alternative method called…

Astrophysics of Galaxies · Physics 2018-09-28 Shihong Liao

The paper is concerned with classic kernel interpolation methods, in addition to approximation methods that are augmented by gradient measurements. To apply kernel interpolation using radial basis functions (RBFs) in a stable way, we…

Numerical Analysis · Mathematics 2021-04-14 Akil Narayan , Liang Yan , Tao Zhou

The accurate robust and efficient transfer of the deformation gradient tensor between meshes of different resolution is crucial in cardiac electromechanics simulations. We present a novel method that combines rescaled localized Radial Basis…

Numerical Analysis · Mathematics 2023-06-02 Michele Bucelli , Francesco Regazzoni , Luca Dede' , Alfio Quarteroni

In this paper, we address the well-known challenge in the numerical solution of time-fractional partial differential equations (TFPDEs), namely, that the dependence on all previous time levels leads to storage requirements that grow…

Numerical Analysis · Mathematics 2026-04-23 Jichun Li , Yangpeng Zhang , Yangwen Zhang

Since the Voronoi diagram appears in many applications, the topic of improving its computational efficiency remains attractive. We propose a novel yet efficient method to compute Voronoi diagrams bounded by a given domain, i.e., the clipped…

Graphics · Computer Science 2026-02-17 Yanyang Xiao , Juan Cao , Zhonggui Chen

Low-lying excited states for indeno[1,2-b]fluorene homo dimers with or without benzene spacers are calculated using the Density Matrix Renormalization group (DMRG) approach within Pariser-Parr-Pople (PPP) model Hamiltonian. DMRG…

Materials Science · Physics 2020-11-03 Sumit Naskar , Mousumi Das

Inverted file and asymmetric distance computation (IVFADC) have been successfully applied to approximate nearest neighbor search and subsequently maximum inner product search. In such a framework, vector quantization is used for coarse…

Machine Learning · Computer Science 2019-03-26 Xiang Wu , Ruiqi Guo , Sanjiv Kumar , David Simcha

We report a complete implementation of the coupled-cluster method with single, double, and triple excitations (CCSDT) where tensor decompositions are used to reduce its scaling and overall computational costs. For the decomposition of the…

Chemical Physics · Physics 2020-02-20 Michał Lesiuk

With tens of petaflops supercomputers already in operation and exaflops machines expected to appear within the next 10 years, efficient parallel computational methods are required to take advantage of such extreme-scale machines. In this…

Materials Science · Physics 2012-11-13 Truong Vinh Truong Duy , Taisuke Ozaki

We develop a new Lagrangian material particle -- dynamical domain decomposition method (MPD^3) for large scale parallel molecular dynamics (MD) simulation of nonstationary heterogeneous systems on a heterogeneous computing net. MPD^3 is…

Distributed, Parallel, and Cluster Computing · Computer Science 2007-05-23 Vasilii Zhakhovskii , Katsunobu Nishihara , Yuko Fukuda , Shinji Shimojo

Intrinsic Delaunay triangulation (IDT) is a fundamental data structure in computational geometry and computer graphics. However, except for some theoretical results, such as existence and uniqueness, little progress has been made towards…

Computational Geometry · Computer Science 2015-05-22 Yong-Jin Liu , Chun-Xu Xu , Dian Fan , Ying He