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Purpose: To perform and evaluate water-fat signal separation of whole-body gradient echo scans using convolutional neural networks. Methods: Whole-body gradient echo scans of 240 subjects, each consisting of 5 bipolar echoes, were used.…

Computer Vision and Pattern Recognition · Computer Science 2019-05-01 Jonathan Andersson , Håkan Ahlström , Joel Kullberg

Purpose: To use a deep neural network (DNN) for solving the optimization problem of water/fat separation and to compare supervised and unsupervised training. Methods: The current T2*-IDEAL algorithm for solving fat/water separation is…

Image and Video Processing · Electrical Eng. & Systems 2020-04-20 R. Jafari , P. Spincemaille , J. Zhang , T. D. Nguyen , M. R. Prince , X. Luo , J. Cho , D. Margolis , Y. Wang

Purpose: An approach for the automated segmentation of visceral adipose tissue (VAT) and subcutaneous adipose tissue (SAT) in multicenter water-fat MRI scans of the abdomen was investigated, using two different neural network architectures.…

Computer Vision and Pattern Recognition · Computer Science 2018-11-02 Taro Langner , Anders Hedström , Katharina Mörwald , Daniel Weghuber , Anders Forslund , Peter Bergsten , Håkan Ahlström , Joel Kullberg

Purpose. Proton Magnetic Resonance Spectroscopic Imaging (1H-MRSI) provides non-invasive spectral-spatial mapping of metabolism. However, long-standing problems in whole-brain 1H-MRSI are spectral overlap of metabolite peaks with large…

Image and Video Processing · Electrical Eng. & Systems 2025-12-16 Paul Weiser , Georg Langs , Stanislav Motyka , Wolfgang Bogner , Sébastien Courvoisier , Malte Hoffmann , Antoine Klauser , Ovidiu C. Andronesi

Flow-Imaging Microscopy (FIM) is commonly used in both academia and industry to characterize subvisible particles (those $\le 25 \mu m$ in size) in protein therapeutics. Pharmaceutical companies are required to record vast volumes of FIM…

Quantitative Methods · Quantitative Biology 2017-09-04 Christopher P. Calderon , Austin L. Daniels , Theodore W. Randolph

Purpose: Magnetic Resonance Spectroscopic Imaging (MRSI) maps endogenous brain metabolism while suppressing the overwhelming water signal. Water-unsuppressed MRSI (wu-MRSI) allows simultaneous imaging of water and metabolites, but large…

Image and Video Processing · Electrical Eng. & Systems 2025-12-18 Paul J. Weiser , Jiye Kim , Jongho Lee , Amirmohammad Shamaei , Gulnur Ungan , Malte Hoffmann , Antoine Klauser , Berkin Bilgic , Ovidiu C. Andronesi

Delimiting salt inclusions from migrated images is a time-consuming activity that relies on highly human-curated analysis and is subject to interpretation errors or limitations of the methods available. We propose to use migrated images…

Deep convolutional neural networks (CNNs) have emerged as a new paradigm for Mammogram diagnosis. Contemporary CNN-based computer-aided-diagnosis (CAD) for breast cancer directly extract latent features from input mammogram image and ignore…

Image and Video Processing · Electrical Eng. & Systems 2020-08-13 Heyi Li , Dongdong Chen , William H. Nailon , Mike E. Davies , David Laurenson

Automatic lymph node (LN) segmentation and detection for cancer staging are critical. In clinical practice, computed tomography (CT) and positron emission tomography (PET) imaging detect abnormal LNs. Despite its low contrast and variety in…

Image and Video Processing · Electrical Eng. & Systems 2022-12-23 Al-Akhir Nayan , Boonserm Kijsirikul , Yuji Iwahori

Purpose: To develop a fat-water separation approach that corrects bipolar readout gradient induced effects, without additional scans, that is compatible with any fat-water separation method. Theory and Methods: The proposed approach…

Medical Physics · Physics 2025-05-20 Jorge Campos Pazmino , Renée-Claude Bider , Véronique Fortier , Ives R. Levesque

Deep learning approaches may help radiologists in the early diagnosis and timely treatment of cerebrovascular diseases. Accurate cerebral vessel segmentation of Time-of-Flight Magnetic Resonance Angiographs (TOF-MRAs) is an essential step…

Image and Video Processing · Electrical Eng. & Systems 2021-01-25 V. de Vos , K. M. Timmins , I. C. van der Schaaf , Y. Ruigrok , B. K. Velthuis , H. J. Kuijf

We present W-Net, a novel Convolution Neural Network (CNN) framework that employs raw ultrasound waveforms from each A-scan, typically referred to as ultrasound Radio Frequency (RF) data, in addition to the gray ultrasound image to…

Advances in deep learning for natural images have prompted a surge of interest in applying similar techniques to medical images. The majority of the initial attempts focused on replacing the input of a deep convolutional neural network with…

Computer Vision and Pattern Recognition · Computer Science 2018-06-29 Krzysztof J. Geras , Stacey Wolfson , Yiqiu Shen , Nan Wu , S. Gene Kim , Eric Kim , Laura Heacock , Ujas Parikh , Linda Moy , Kyunghyun Cho

The utilisation of deep learning segmentation algorithms that learn complex organs and tissue patterns and extract essential regions of interest from the noisy background to improve the visual ability for medical image diagnosis has…

Computer Vision and Pattern Recognition · Computer Science 2023-11-03 Yanming Guo

One of the most crucial tasks in seismic reflection imaging is to identify the salt bodies with high precision. Traditionally, this is accomplished by visually picking the salt/sediment boundaries, which requires a great amount of manual…

Geophysics · Physics 2019-09-18 Yu Zeng , Kebei Jiang , Jie Chen

The prediction of salient areas in images has been traditionally addressed with hand-crafted features based on neuroscience principles. This paper, however, addresses the problem with a completely data-driven approach by training a…

Computer Vision and Pattern Recognition · Computer Science 2016-03-03 Junting Pan , Kevin McGuinness , Elisa Sayrol , Noel O'Connor , Xavier Giro-i-Nieto

Deep convolutional neural networks have become a key element in the recent breakthrough of salient object detection. However, existing CNN-based methods are based on either patch-wise (region-wise) training and inference or fully…

Computer Vision and Pattern Recognition · Computer Science 2018-04-03 Guanbin Li , Yizhou Yu

Normal fetal adipose tissue (AT) development is essential for perinatal well-being. AT, or simply fat, stores energy in the form of lipids. Malnourishment may result in excessive or depleted adiposity. Although previous studies showed a…

The recent application of deep learning in various areas of medical image analysis has brought excellent performance gains. In particular, technologies based on deep learning in medical image registration can outperform traditional…

Image and Video Processing · Electrical Eng. & Systems 2019-09-09 Abdullah Nazib , Clinton Fookes , Dimitri Perrin

Deep learning has dramatically improved the performance of sounds recognition. However, learning acoustic models directly from the raw waveform is still challenging. Current waveform-based models generally use time-domain convolutional…

Sound · Computer Science 2018-03-29 Boqing Zhu , Changjian Wang , Feng Liu , Jin Lei , Zengquan Lu , Yuxing Peng
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