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Computing the reversal distances of signed permutations is an important topic in Bioinformatics. Recently, a new lower bound for the reversal distance was obtained via the plane permutation framework. This lower bound appears different from…
We present an adaptive algorithm with one-sided error for the problem of junta testing for Boolean function under the challenging distribution-free setting, the query complexity of which is $\widetilde O(k)/\epsilon$. This improves the…
We consider the problem of testing whether an unknown Boolean function $f$ is monotone versus $\epsilon$-far from every monotone function. The two main results of this paper are a new lower bound and a new algorithm for this well-studied…
We bound the number of permutations with a fixed number $r$ of $321 \ominus p_0$ patterns by a constant times the number of permutations which avoid $321 \ominus p_0$. We use this new upper bound to show that the ordinary generating…
Bayes' Theorem confers inherent limitations on the accuracy of screening tests as a function of disease prevalence. We have shown in previous work that a testing system can tolerate significant drops in prevalence, up until a certain…
Given $n$ elements, an integer $k$ and a parameter $\varepsilon$, we study to select an element with rank in $(k-n\varepsilon,k+n\varepsilon]$ using unreliable comparisons where the outcome of each comparison is incorrect independently with…
The set of all permutations with $n$ symbols is a symmetric group denoted by $S_n$. A transposition tree, $T$, is a spanning tree over its $n$ vertices $V_T=${$1, 2, 3, \ldots n$} where the vertices are the positions of a permutation $\pi$…
Let $F$ be a $k\times \ell$ (0,1)-matrix. Define a (0,1)-matrix $A$ to have a $F$ as a \emph{configuration} if there is a submatrix of $A$ which is a row and column permutation of $F$. In the language of sets, a configuration is a…
We study the space complexity of implementing long-lived and one-shot adaptive renaming from multi-reader multi-writer registers, in an asynchronous distributed system with $n$ processes. As a result of an $f$-adaptive renaming algorithm…
The Permutation Pattern Matching problem asks, given two permutations $\sigma$ on $n$ elements and $\pi$, whether $\sigma$ admits a subsequence with the same relative order as $\pi$ (or, in the counting version, how many such subsequences…
We study Mallows random permutations conditioned to avoid a given pattern $\alpha$ of length~$3$. When the bias parameter is of the form $e^{\beta/n}$, we prove that these permutations converge to a non-trivial explicit deterministic…
For positive integers $n, d$, consider the hypergrid $[n]^d$ with the coordinate-wise product partial ordering denoted by $\prec$. A function $f: [n]^d \mapsto \mathbb{N}$ is monotone if $\forall x \prec y$, $f(x) \leq f(y)$. A function $f$…
Let $S_{\rm div}(n)$ denote the set of permutations $\pi$ of $n$ such that for each $1\leq j \leq n$ either $j \mid \pi(j)$ or $\pi(j) \mid j$. These permutations can also be viewed as vertex-disjoint directed cycle covers of the divisor…
We prove two lower bounds for stopping times of sequential tests between general composite nulls and alternatives. The first lower bound is for the setting where the type-1 error level $\alpha$ approaches zero, and equals $\log(1/\alpha)$…
We prove that the permutation computed by a reversible circuit with $\tilde{O}(nk\cdot \log(1/\varepsilon))$ random $3$-bit gates is $\varepsilon$-approximately $k$-wise independent. Our bound improves on currently known bounds in the…
We study the length of cycles of random permutations drawn from the Mallows distribution. Under this distribution, the probability of a permutation $\pi \in \mathbb{S}_n$ is proportional to $q^{\textrm{inv}(\pi)}$ where $0<q\le 1$ and…
We study cycle counts in permutations of $1,\dots,n$ drawn at random according to the Mallows distribution. Under this distribution, each permutation $\pi \in S_n$ is selected with probability proportional to $q^{\text{inv}(\pi)}$, where…
In a previous work, B\'ona and Pantone studied permutations that avoided all but one pattern of length $k$ that began with a length $k-1$ increasing subsequence. We draw the connection between that idea and distant patterns, first discussed…
Let $n$, $s$ and $k$ be positive integers. For distinct $i,j\in\mathbb{Z}_n$, define $||i,j||_n$ to be the distance between $i$ and $j$ when the elements of $\mathbb{Z}_n$ are written in a circle. So \[ ||i,j||_n=\min\{(i-j)\bmod…
Multiple hypothesis testing is a significant problem in nearly all neuroimaging studies. In order to correct for this phenomena, we require a reliable estimate of the Family-Wise Error Rate (FWER). The well known Bonferroni correction…