Related papers: Computing Tropical Varieties in Macaulay2
This note introduces the $\texttt{LikelihoodGeometry}$ package for the computer algebra system $\textit{Macaulay2}$. This package gives tools to construct the likelihood correspondence of a discrete algebraic statistical model, a variety…
We present algorithms for computing zero-dimensional tropical varieties as implemented in OscarZerodimensionalTropicalization.jl. The algorithms include a mathematical workaround for a common practical issue arising when working with…
The Macaulay2 package DecomposableSparseSystems implements methods for studying and numerically solving decomposable sparse polynomial systems. We describe the structure of decomposable sparse systems and explain how the methods in this…
GPUs are dedicated processors used for complex calculations and simulations and they can be effectively used for tropical algebra computations. Tropical algebra is based on max-plus algebra and min-plus algebra. In this paper we proposed…
We introduce the \verb|Macaulay2| package \verb|RepHomology| for the computations of representation homology of certain spaces. The main methods implement computing the representation homology of surfaces (with group coefficients, and…
These notes survey some basic results in toric varieties over a field with examples and applications. A computer algebra package (written by the second author) is described which deals with both affine and projective toric varieties in any…
This is a guide on how to create 3d printable models of tropical surfaces, curves, and combinations thereof. It uses Polymake to construct bounded models of the tropical objects, and OpenSCAD to thicken and export them to any common 3D…
Tropical varieties capture combinatorial information about how coordinates of points in a classical variety approach zero or infinity. We present algorithms for computing the rays of a complex and real tropical curve defined by polynomials…
The software TrIm offers implementations of tropical implicitization and tropical elimination, as developed by Tevelev and the authors. Given a polynomial map with generic coefficients, TrIm computes the tropical variety of the image. When…
We introduce the Macaulay2 package BooleanGB, which computes a Gr\"obner basis for Boolean polynomials using a binary representation rather than symbolic. We compare the runtime of several Boolean models from systems in biology and give an…
Tropical algebra is an emerging field with a number of applications in various areas of mathematics. In many of these applications appeal to tropical polynomials allows to study properties of mathematical objects such as algebraic varieties…
We present a package to perform partial fraction decompositions of multivariate rational functions. The algorithm allows to systematically avoid spurious denominator factors and is capable of producing unique results also when being applied…
The MultiplicitySequence package for Macaulay2 computes the multiplicity sequence of a graded ideal in a standard graded ring over a field, as well as several invariants of monomial ideals related to integral dependence. We discuss two…
{\tt AbstractSimplicialComplexes.m2} is a computer algebra package written for the computer algebra system {\tt Macaulay2} \cite{M2}. It provides new infrastructure to work with abstract simplicial complexes and related homological…
A polynomial complexity algorithm is designed which tests whether a point belongs to a given tropical linear variety.
We give a computational algorithm for computing Ext groups between bounded complexes of coherent sheaves on a projective variety, and we describe an implementation of this algorithm in Macaulay2. In particular, our results yield methods for…
We describe the main functions of the Macaulay2 package Quasidegrees. The purpose of this package is to compute the quasidegree set of a finitely generated A-graded module presented as the cokernel of a monomial matrix. We provide examples…
In this Macaulay2 \cite{M2} package we define an object called {\it linear code}. We implement functions that compute basic parameters and objects associated with a linear code, such as generator and parity check matrices, the dual code,…
This note describes a Macaulay2 package for handling divisors. Group operations for divisors are included. There are methods for converting divisors to reflexive or invertible sheaves. Additionally, there are methods for checking whether…
Topological invariants such as characteristic classes are an important tool to aid in understanding and categorizing the structure and properties of algebraic varieties. In this note we consider the problem of computing a particular…