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We study the dynamics of hydration water/protein association in folded proteins, using lysozyme and myoglobin as examples. Extensive molecular dynamics simulations are performed to identify underlying mechanisms of the dynamical transition…

Soft Condensed Matter · Physics 2015-05-13 J. Servantie , C. Atilgan , A. R. Atilgan

We investigate non-equilibrium electron dynamics in crystalline ZnO induced by ultrashort, relatively intense, infrared laser pulses. Our focus is on understanding the mechanism that facilitates efficient conduction band population in ZnO…

Materials Science · Physics 2025-03-21 Xiao Chen , Thomas Lettau , Ulf Peschel , Nicolas Tancogne-Dejean , Silvana Botti

The design of moderators and cold sources of neutrons is a key point in research-reactor physics, requiring extensive knowledge of the scattering properties of very important light molecular liquids such as methane, hydrogen and their…

Other Condensed Matter · Physics 2021-04-13 Eleonora Guarini

While the statistical mechanical description of DNA has a long tradition, renewed interest in DNA melting from a physics perspective is nourished by measurements of the fluctuation dynamics of local denaturation bubbles by single molecule…

Biomolecules · Quantitative Biology 2009-11-13 Tobias Ambjornsson , Suman K. Banik , Oleg Krichevsky , Ralf Metzler

Quantum-mechanical van der Waals dispersion interactions play an essential role for both intra-protein and protein-water interactions -- the two main driving forces for the structure and dynamics of proteins in aqueous solution. Typically,…

Chemical Physics · Physics 2019-10-22 Martin Stöhr , Alexandre Tkatchenko

Ultrafast time-resolved optical spectroscopy in high-temperature superconductors enables the direct real-time measurement of non-equilibrium quasiparticle recombination dynamics. In addition, it also gives detailed information about the…

Superconductivity · Physics 2007-05-23 D. Mihailovic , J. Demsar

Studying the changed water dynamics in the hydration layers of biomolecules is an important step towards fuller understanding of their function and mechanisms, but has shown to be quite difficult. The measurement of the time-dependent…

Chemical Physics · Physics 2021-05-20 Esther Heid , Christian Schröder

Photoexcitation by ultrashort laser pulses plays a crucial role in controlling reaction pathways, creating nonequilibrium material properties, and offering a microscopic view of complex dynamics at the molecular level. The photo response…

This study explores the possibility to measure dynamics of proteins in solution using X-ray photon correlation spectroscopy (XPCS) at nearly diffraction limited storage rings (DLSR). We calculate the signal to noise ratio (SNR) of XPCS…

Instrumentation and Detectors · Physics 2019-10-01 Johannes Möller , Michael Sprung , Anders Madsen , Christian Gutt

Glycerol and trehalose-glycerol binary solutions are glass-forming liquids with remarkable bioprotectant properties. Incoherent quasielastic neutron scattering (QENS) is used to reveal the different effects of nanoconfinement and addition…

We report incoherent quasielastic neutron scattering experiments on the thermotropic liquid crystal 4-n-cyano-4'-octylbiphenyl. The combination of time-of-flight and backscattering data allows analyzing the intermediate scattering function…

Interpretation of current and future neutrino oscillation and electron scattering experiments requires knowledge of lepton-nucleon and lepton-nucleus interactions at the percent level. We study the exchange of photons between charged…

Nuclear Theory · Physics 2022-10-19 Oleksandr Tomalak , Ivan Vitev

The observation of coherent elastic neutrino nucleus scattering has opened the window to many physics opportunities. This process has been measured by the COHERENT Collaboration using two different targets, first CsI and then argon.…

High Energy Physics - Phenomenology · Physics 2023-04-26 V. De Romeri , O. G. Miranda , D. K. Papoulias , G. Sanchez Garcia , M. Tórtola , J. W. F. Valle

We introduce a model description of femtosecond laser induced desorption at surfaces. The substrate part of the system is taken into account as a (possibly semi-infinite) linear chain. Here, being especially interested in the early stages…

Mesoscale and Nanoscale Physics · Physics 2016-05-25 Emil Boström , Anders Mikkelsen , Claudio Verdozzi

S-nitrosylation, the covalent addition of NO to the thiol side chain of cysteine, is an important post-transitional modification (PTM) that can affect the function of proteins. As such, PTMs extend and diversify protein functions and thus…

Chemical Physics · Physics 2022-09-13 Haydar Taylan Turan , Markus Meuwly

The resource theory of quantum thermodynamics has emerged as a powerful tool for exploring the out-of-equilibrium dynamics of microscopic and highly correlated systems. Recently, it has been employed in photoisomerization, a mechanism…

Quantum Physics · Physics 2024-12-19 Mattheus Burkhard , Onur Pusuluk , Tristan Farrow

Proteins involved in signaling pathways represent an interesting target for experimental analysis by ODNP (Overhauser Dynamic Nuclear Polarization), which determines the translational mobility at the surface of proteins. They also represent…

Soft Condensed Matter · Physics 2023-07-11 Farhana Syed , Jessica N. Khuc , Alexandria Guinness , John M Franck

Time-resolved measurements of quantum dynamics are based on the availability of controlled events (e.g. pump and probe pulses) that are shorter in duration than the typical evolution time scale of the dynamical processes to be observed.…

Ultrafast lasers have become one of the most powerful tools in coherent nonlinear optical spectroscopy. Short pulses enable direct observation of fast molecular dynamics, whereas broad spectral bandwidth offers ways of controlling nonlinear…

Chemical Physics · Physics 2015-05-13 X. G. Xu , S. O. Konorov , J. W. Hepburn , V. Milner

Water plays a major role in bio-systems, greatly contributing to determine their structure, stability and even function. It is well know, for instance, that proteins require a minimum amount of water to be functionally active. Since the…

Biological Physics · Physics 2019-04-05 Antonio Benedetto