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Post-genomic research deals with challenging problems in screening genomes of organisms for particular functions or potential for being the targets of genetic engineering for desirable biological features. 'Phenotyping' of wild type and…

Quantitative Methods · Quantitative Biology 2010-09-06 Hesam T. Dashti , Jernej Tonejc , Adel Ardalan , Alireza F. Siahpirani , Sabrina Guettes , Zohreh Sharif , Liya Wang , Amir H. Assadi

Plant phenotyping (Guo et al. 2021; Pieruschka et al. 2019) focuses on studying the diverse traits of plants related to the plants' growth. To be more specific, by accurately measuring the plant's anatomical, ontogenetical, physiological…

Machine Learning · Computer Science 2022-01-17 Jun Wu , Elizabeth A. Ainsworth , Sheng Wang , Kaiyu Guan , Jingrui He

Cotton crops, often called "white gold," face significant production challenges, primarily due to various leaf-affecting diseases. As a major global source of fiber, timely and accurate disease identification is crucial to ensure optimal…

Computer Vision and Pattern Recognition · Computer Science 2025-06-27 Aswini Kumar Patra , Tejashwini Gajurel

The increasing popularity of Artificial Intelligence in recent years has led to a surge in interest in image classification, especially in the agricultural sector. With the help of Computer Vision, Machine Learning, and Deep Learning, the…

Computer Vision and Pattern Recognition · Computer Science 2024-08-23 Sudi Murindanyi , Joyce Nakatumba-Nabende , Rahman Sanya , Rose Nakibuule , Andrew Katumba

Being able to interpret, or explain, the predictions made by a machine learning model is of fundamental importance. This is especially true when there is interest in deploying data-driven models to make high-stakes decisions, e.g. in…

Machine Learning · Computer Science 2019-10-01 An-phi Nguyen , María Rodríguez Martínez

Modern scientific and technological advances allow botanists to use computer vision-based approaches for plant identification tasks. These approaches have their own challenges. Leaf classification is a computer-vision task performed for the…

Computer Vision and Pattern Recognition · Computer Science 2022-08-19 Ali Beikmohammadi , Karim Faez , Ali Motallebi

Interpretation and explanation of deep models is critical towards wide adoption of systems that rely on them. In this paper, we propose a novel scheme for both interpretation as well as explanation in which, given a pretrained model, we…

Computer Vision and Pattern Recognition · Computer Science 2019-03-11 Jose Oramas , Kaili Wang , Tinne Tuytelaars

With the availability of large databases and recent improvements in deep learning methodology, the performance of AI systems is reaching or even exceeding the human level on an increasing number of complex tasks. Impressive examples of this…

Artificial Intelligence · Computer Science 2017-08-29 Wojciech Samek , Thomas Wiegand , Klaus-Robert Müller

We propose a novel perspective to understand deep neural networks in an interpretable disentanglement form. For each semantic class, we extract a class-specific functional subnetwork from the original full model, with compressed structure…

Machine Learning · Computer Science 2019-10-08 Yulong Wang , Xiaolin Hu , Hang Su

Automatic plant classification is a challenging problem due to the wide biodiversity of the existing plant species in a fine-grained scenario. Powerful deep learning architectures have been used to improve the classification performance in…

Computer Vision and Pattern Recognition · Computer Science 2021-10-05 Voncarlos M. Araujo , Alceu S. Britto , Luiz E. S. Oliveira , Alessandro L. Koerich

Deep Learning based models are currently dominating most state-of-the-art solutions for disease prediction. Existing works employ RNNs along with multiple levels of attention mechanisms to provide interpretability. These deep learning…

Machine Learning · Statistics 2022-06-01 Subhadip Maji , Raghav Bali , Sree Harsha Ankem , Kishore V Ayyadevara

Deep neural network models have been proven to be very successful in image classification tasks, also for medical diagnosis, but their main concern is its lack of interpretability. They use to work as intuition machines with high…

Machine Learning · Computer Science 2019-04-26 Jordi de la Torre , Aida Valls , Domenec Puig

Plants are fundamentally important to life. Key research areas in plant science include plant species identification, weed classification using hyper spectral images, monitoring plant health and tracing leaf growth, and the semantic…

Computer Vision and Pattern Recognition · Computer Science 2020-09-15 K. K. Thyagharajan , I. Kiruba Raji

Crops for food, feed, fiber, and fuel are key natural resources for our society. Monitoring plants and measuring their traits is an important task in agriculture often referred to as plant phenotyping. Traditionally, this task is done…

Computer Vision and Pattern Recognition · Computer Science 2024-01-18 Gianmarco Roggiolani , Federico Magistri , Tiziano Guadagnino , Jens Behley , Cyrill Stachniss

We present a deformable prototypical part network (Deformable ProtoPNet), an interpretable image classifier that integrates the power of deep learning and the interpretability of case-based reasoning. This model classifies input images by…

Computer Vision and Pattern Recognition · Computer Science 2024-05-06 Jon Donnelly , Alina Jade Barnett , Chaofan Chen

Image classification is an essential part of computer vision which assigns a given input image to a specific category based on the similarity evaluation within given criteria. While promising classifiers can be obtained through deep…

Computer Vision and Pattern Recognition · Computer Science 2024-07-09 Emma Andrews , Prabhat Mishra

When we deploy machine learning models in high-stakes medical settings, we must ensure these models make accurate predictions that are consistent with known medical science. Inherently interpretable networks address this need by explaining…

Computer Vision and Pattern Recognition · Computer Science 2021-10-06 Alina Jade Barnett , Fides Regina Schwartz , Chaofan Tao , Chaofan Chen , Yinhao Ren , Joseph Y. Lo , Cynthia Rudin

Deep learning has driven significant advances in medical image analysis, yet its adoption in clinical practice remains constrained by the large size and lack of transparency in modern models. Advances in interpretability techniques such as…

Computer Vision and Pattern Recognition · Computer Science 2025-09-23 Nikita Malik , Pratinav Seth , Neeraj Kumar Singh , Chintan Chitroda , Vinay Kumar Sankarapu

Plant phenotyping focuses on the measurement of plant characteristics throughout the growing season, typically with the goal of evaluating genotypes for plant breeding. Estimating plant location is important for identifying genotypes which…

Computer Vision and Pattern Recognition · Computer Science 2020-04-30 Enyu Cai , Sriram Baireddy , Changye Yang , Melba Crawford , Edward J. Delp

The ability to simulate realistic networks based on empirical data is an important task across scientific disciplines, from epidemiology to computer science. Often simulation approaches involve selecting a suitable network generative model…

Social and Information Networks · Computer Science 2024-06-13 Raima Carol Appaw , Nicholas Fountain-Jones , Michael A. Charleston