Related papers: How to encode a tree
Graph Isomorphism (GI) is a fundamental algorithmic problem. Amongst graph classes for which the computational complexity of GI has been resolved, trees are arguably the most fundamental. Tree Isomorphism is complete for deterministic…
A combinatorial Gray code for a set of combinatorial objects is a sequence of all combinatorial objects in the set so that each object is derived from the preceding object by changing a small part. In this paper we design a Gray code for…
We reduce the calculation of the simplest Hodge integrals to some sums over decorated trees. Since Hodge integrals are already calculated, this gives a proof of a rather interesting combinatorial theorem and a new representation of…
Fast exact algorithms are known for Hamiltonian paths in undirected and directed bipartite graphs through elegant though involved algorithms that are quite different from each other. We devise algorithms that are simple and similar to each…
The structure of an evolving network contains information about its past. Extracting this information efficiently, however, is, in general, a difficult challenge. We formulate a fast and efficient method to estimate the most likely history…
We formalize an existing computability-theoretic method of presenting first-order structures whose domains have the cardinality of the continuum. Work using these methods until now has emphasized their topological properties. We shift the…
The most fundamental problem in statistical causality is determining causal relationships from limited data. Probability trees, which combine prior causal structures with Bayesian updates, have been suggested as a possible solution. In this…
Tree-like tableaux are objects in bijection with alternative or permutation tableaux. They have been the subject of a fruitful combinatorial study for the past few years. In the present work, we define and study a new subclass of tree-like…
We consider the multivariate interlace polynomial introduced by Courcelle (2008), which generalizes several interlace polynomials defined by Arratia, Bollobas, and Sorkin (2004) and by Aigner and van der Holst (2004). We present an…
In this paper, we provide algorithms to rank, unrank, and randomly generate certain degree-restricted classes of Cayley trees. Specifically, we consider classes of trees that have a given degree sequence or a given multiset of degrees. If…
Following Poupard's study of strictly ordered binary trees with respect to two parameters, namely, "end of minimal chain" and "parent of maximum leaf" a true Tree Calculus is being developed to solve a partial difference equation system and…
Routing tables in ad hoc and wireless routing protocols can be represented using rooted trees. The constant need for communication and storage of these trees in routing protocols demands an efficient rooted tree coding algorithm. This…
For a natural class of $r \times n$ integer matrices, we construct a non-convex polytope which periodically tiles $\mathbb R^n$. From this tiling, we provide a family of geometrically meaningful maps from a generalized sandpile group to a…
In this paper, we study tree--like tableaux, combinatorial objects which exhibit a natural tree structure and are connected to the partially asymmetric simple exclusion process (PASEP). There was a conjecture made on the total number of…
Programs that manipulate tree-shaped data structures often require complex, specialized proofs that are difficult to generalize and automate. This paper introduces a unified, foundational approach to verifying such programs. Central to our…
For a model of molecular evolution to be useful for phylogenetic inference, the topology of evolutionary trees must be identifiable. That is, from a joint distribution the model predicts, it must be possible to recover the tree parameter.…
We report our experiences for the development of a neighborhood algorithm implemented via tree-codes to optimize the performance of a discrete element method (DEM) for convex polytopes. Our implementation of the two-dimensional tree code…
We prove a weighted generalization of the formula for the number of plane vertex-labeled trees.
Bayesian networks can be used to extract explanations about the observed state of a subset of variables. In this paper, we explicate the desiderata of an explanation and confront them with the concept of explanation proposed by existing…
We study an abstract notion of tree structure which lies at the common core of various tree-like discrete structures commonly used in combinatorics: trees in graphs, order trees, nested subsets of a set, tree-decompositions of graphs and…