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Biological phenomena differ significantly from physical phenomena. At the heart of this distinction is the fact that biological entities have computational abilities and thus they are inherently difficult to predict. This is the reason why…

Molecular Networks · Quantitative Biology 2009-09-29 Pau Fernandez , Ricard V. Sole

Despite the importance of non-equilibrium statistical mechanics in modern physics and related fields, the topic is often omitted from undergraduate and core-graduate curricula. Key aspects of non-equilibrium physics, however, can be…

Statistical Mechanics · Physics 2021-11-03 Daniel M. Zuckerman , John D. Russo

We numerically demonstrate inhibition of absorption, optical transparency, and anomalous momentum states of phase locked harmonic pulses in semiconductors, at UV and extreme UV frequencies, in spectral regions where the dielectric constant…

The phenomenon of neutrino oscillations has been established as the leading mechanism behind neutrino flavor transitions, providing solid experimental evidence that neutrinos are massive and lepton flavors are mixed. Here we review…

High Energy Physics - Phenomenology · Physics 2013-03-21 Tommy Ohlsson

Chronic diseases can greatly benefit from bioelectronic medicine approaches. Neuromorphic electronic circuits present ideal characteristics for the development of brain-inspired low-power implantable processing systems that can be…

Emerging Technologies · Computer Science 2021-02-22 Elisa Donati , Renate Krause , Giacomo Indiveri

In many industrial applications, signals with short periodic pulses, caused by repeated steps in the manufacturing process, are present, and their fundamental frequency or period may be of interest. Fundamental frequency estimation is in…

This paper considers a spin chain model by numerically solving the exact model to explore the non-perturbative dynamical decoupling regime, where an important issue arises recently (J. Jing, L.-A. Wu, J. Q. You and T. Yu, arXiv:1202.5056.).…

Quantum Physics · Physics 2015-06-04 Zhao-Ming Wang , Lian-Ao Wu , Jun Jing , Bin Shao , Ting Yu

Soft colloids allow to explore high density states well beyond random close packing. An important open question is whether softness controls the dynamics under these dense conditions. While experimental works reported conflicting results,…

Soft Condensed Matter · Physics 2021-06-08 Nicoletta Gnan , Emanuela Zaccarelli

A cell is polarised when it has developed a main axis of organisation through the reorganisation of its cytosqueleton and its intracellular organelles. Polarisation can occur spontaneously or be triggered by external signals, like gradients…

Analysis of PDEs · Mathematics 2013-01-17 Vincent Calvez , Nicolas Meunier , Nicolas Muller , Raphael Voituriez

The formation of DNA loops by proteins and protein complexes is ubiquitous to many fundamental cellular processes, including transcription, recombination, and replication. Here we review recent advances in understanding the properties of…

Biomolecules · Quantitative Biology 2007-05-23 Leonor Saiz , Jose M. G. Vilar

The field of basal cognition seeks to understand how adaptive, context-specific behavior occurs in non-neural biological systems. Embryogenesis and regeneration require plasticity in many tissue types to achieve structural and functional…

Neurons and Cognition · Quantitative Biology 2019-12-10 Santosh Manicka , Michael Levin

Non-linear effects in accelerator physics are important for both successful operation of accelerators and during the design stage. Since both of these aspects are closely related, they will be treated together in this overview. Some of the…

Accelerator Physics · Physics 2016-01-22 W. Herr

The phenomenon of pulsar nulling -- where pulsars occasionally turn off for one or more pulses -- provides insight into pulsar-emission mechanisms and the processes by which pulsars turn off when they cross the "death line." However, while…

Instrumentation and Methods for Astrophysics · Physics 2018-03-14 David L. Kaplan , Joseph K. Swiggum , Travis D. J. Fichtenbauer , Michele Vallisneri

Computation of biological processes creates great promise for everyday life and great challenges for physical scientists. Simulations of molecular dynamics appeal to biologists as a natural extension of structural biology. Once biologists…

Biomolecules · Quantitative Biology 2019-03-05 Bob Eisenberg

We discuss dynamics obtained by increasing powers of non-normal matrices that are roots of the identity, and therefore have all eigenvalues on the unit circle. Naively, one would expect that the expectation value of such powers cannot grow…

Mathematical Physics · Physics 2025-10-02 Junaid Majeed Bhat , Jaš Bensa , Marko Žnidarič

Along with recent progress in structural biology and genome biology, structural dynamics of molecular systems including nucleic acids has attracted attention in the context of gene regulation. Structure-function relationship is an important…

Biomolecules · Quantitative Biology 2021-11-23 Takeru Kameda , Akinori Awazu , Yuichi Togashi

Accelerator-based neutrino oscillation experiments have the potential to revolutionise our understanding of fundamental physics, offering an opportunity to characterise charge-parity violation in the lepton section, to determine the…

High Energy Physics - Experiment · Physics 2023-01-24 S. Dolan

Voltage and charge distributions in cellular microdomains regulate communications, excitability, and signal transduction. We report here new electrical laws in a cell, which follow from a nonlinear electro-diffusion model. These newly…

Biological Physics · Physics 2017-01-03 Jerome Cartailler , Zeev Schuss , David Holcman

Unknown nonlinear dynamics can limit the performance of model-based feedforward control. The aim of this paper is to develop a feedforward control framework for systems with unknown, typically nonlinear, dynamics. To address the unknown…

Systems and Control · Electrical Eng. & Systems 2023-03-31 Johan Kon , Dennis Bruijnen , Jeroen van de Wijdeven , Marcel Heertjes , Tom Oomen

We perform a theoretical study of the dynamics of the electric field excitations in a microtubule by taking into consideration the realistic cylindrical geometry, dipole-dipole interactions of the tubulin-based protein heterodimers, the…

Biological Physics · Physics 2016-06-29 Alexander I Nesterov , Mónica F Ramírez , Gennady P Berman , Nick E Mavromatos