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In systems biology, it is common to measure biochemical entities at different levels of the same biological system. One of the central problems for the data fusion of such data sets is the heterogeneity of the data. This thesis discusses…

Genomics · Quantitative Biology 2019-08-27 Yipeng Song

Motivation: There is a growing need to integrate mechanistic models of biological processes with computational methods in healthcare in order to improve prediction. We apply data assimilation in the context of Type 2 diabetes to understand…

The amount of data in the world is expanding rapidly. Every day, huge amounts of data are created by scientific experiments, companies, and end users' activities. These large data sets have been labeled as "Big Data", and their storage,…

Databases · Computer Science 2020-04-29 Mahdi Bohlouli , Frank Schulz , Lefteris Angelis , David Pahor , Ivona Brandic , David Atlan , Rosemary Tate

Data analysis is a powerful tool in all experimental sciences. Statistical methods, such as sampling theory, computer technologies necessary for handling large amounts of data, skill in analysing information contained in different types of…

Physics Education · Physics 2012-06-20 Vera Montalbano

The metabolic wiring of patient cells is altered drastically in many diseases, including cancer. Understanding the nature of such changes may pave the way for new therapeutic opportunities, as well as the development of personalized…

Molecular Networks · Quantitative Biology 2020-02-12 Ali Cakmak , M. Hasan Celik

Understanding functional organization of genetic information is a major challenge in modern biology. Following the initial publication of the human genome sequence in 2001, advances in high-throughput measurement technologies and efficient…

Machine Learning · Statistics 2011-03-01 Leo Lahti

Meta-analysis employs statistical techniques to synthesize the results of individual studies, providing an estimate of the overall effect size for a specific outcome of interest. The direction and magnitude of this estimate, along with its…

Econometrics · Economics 2025-03-06 Amin Haghnejad , Mahboobeh Farahati

A pandemic poses particular challenges to decision-making because of the need to continuously adapt decisions to rapidly changing evidence and available data. For example, which countermeasures are appropriate at a particular stage of the…

Informatics and technological advancements have triggered generation of huge volume of data with varied complexity in its management and analysis. Big Data analytics is the practice of revealing hidden aspects of such data and making…

Databases · Computer Science 2018-03-30 Bikram Karmakar , Indranil Mukhopadhyay

Thousands of metabolomic papers are published each year, creating challenges for scientists to combine results and yield conclusions that span across studies. Literature databases such as the Human Metabolome Database provide summaries of…

Quantitative Methods · Quantitative Biology 2024-10-24 Delilah Milner , Oliver Fiehn

The advent of modern technology, permitting the measurement of thousands of characteristics simultaneously, has given rise to floods of data characterized by many large or even huge datasets. This new paradigm presents extraordinary…

Methodology · Statistics 2019-02-14 A. M. Pires , J. A. Branco

Recent attacks of various viruses with having deep and extensive impact at a global scale has warranted that microbiome be studied extensively and in a robust analytic framework. Microbiome typically refers to the collective genomes of such…

Applications · Statistics 2023-03-30 M. Bhattacharjee

Acute stroke demands prompt diagnosis and treatment to achieve optimal patient outcomes. However, the intricate and irregular nature of clinical data associated with acute stroke, particularly blood pressure (BP) measurements, presents…

Human-Computer Interaction · Computer Science 2024-07-24 Jaeyoung Kim , Sihyeon Lee , Hyeon Jeon , Keon-Joo Lee , Hee-Joon Bae , Bohyoung Kim , Jinwook Seo

The main aim of this paper is to provide a deep analysis on the research field of healthcare data analytics. This paper is analyzing the previous studies and works in this research area, as well as highlighting some of guidelines and gaps.…

Computers and Society · Computer Science 2016-06-07 Mohammad Alkhatib , Amir Talaei-Khoei , Amir Ghapanchi

Workflow is a common term used to describe a systematic breakdown of tasks that need to be performed to solve a problem. This concept has found best use in scientific and business applications for streamlining and improving the performance…

Distributed, Parallel, and Cluster Computing · Computer Science 2017-11-08 Samiya Khan , Kashish Ara Shakil , Mansaf Alam

The histological assessment of human tissue has emerged as the key challenge for detection and treatment of cancer. A plethora of different data sources ranging from tissue microarray data to gene expression, proteomics or metabolomics data…

Computer Vision and Pattern Recognition · Computer Science 2016-01-05 Thomas J. Fuchs , Joachim M. Buhmann

Quite generally, constraint-based metabolic flux analysis describes the space of viable flux configurations for a metabolic network as a high-dimensional polytope defined by the linear constraints that enforce the balancing of production…

Molecular Networks · Quantitative Biology 2013-09-24 Francesco Alessandro Massucci , Francesc Font-Clos , Andrea De Martino , Isaac Pérez Castillo

Phenotypic variation is a hallmark of cellular physiology. Metabolic heterogeneity, in particular, underpins single-cell phenomena such as microbial drug tolerance and growth variability. Much research has focussed on transcriptomic and…

Molecular Networks · Quantitative Biology 2019-01-31 Mona K. Tonn , Philipp Thomas , Mauricio Barahona , Diego A Oyarzún

This article explores the critical role of statistical analysis in precision medicine. It discusses how personalized healthcare is enhanced by statistical methods that interpret complex, multidimensional datasets, focusing on predictive…

Machine Learning · Computer Science 2024-01-17 Xiaofei Chen

The increasing application of social and human-enabled systems in people's daily life from one side and from the other side the fast growth of mobile and smart phones technologies have resulted in generating tremendous amount of data, also…

Human-Computer Interaction · Computer Science 2016-04-19 Mohammad Allahbakhsh , Saeed Arbabi , Hamid-Reza Motahari-Nezhad , Boualem Benatallah