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High-dimensional omics datasets are routinely visualized as heatmaps, where color intensities reveal co-expression patterns and correlations. However, modern omics technologies increasingly generate matrices so large that existing visual…

Genomics · Quantitative Biology 2026-04-21 Osho Rawal , Rex Lu , Edgar Gonzalez-Kozlova , Sacha Gnjatic , Zeynep H. Gümüş

Hierarchical clustering is a powerful tool for exploratory data analysis, organizing data into a tree of clusterings from which a partition can be chosen. This paper generalizes these ideas by proving that, for any reasonable hierarchy, one…

Machine Learning · Computer Science 2025-11-13 Andrew Draganov , Pascal Weber , Rasmus Skibdahl Melanchton Jørgensen , Anna Beer , Claudia Plant , Ira Assent

Interactive visualization of embedding projections is a useful technique for understanding data and evaluating machine learning models. Labeling data within these visualizations is critical for interpretation, as labels provide an overview…

Human-Computer Interaction · Computer Science 2025-05-20 Donghao Ren , Fred Hohman , Dominik Moritz

Clustering is a common technique for statistical data analysis, which is used in many fields, including machine learning, data mining, pattern recognition, image analysis and bioinformatics. Clustering is the process of grouping similar…

Data Structures and Algorithms · Computer Science 2012-05-08 T. Soni Madhulatha

Graph-based clustering methods have demonstrated the effectiveness in various applications. Generally, existing graph-based clustering methods first construct a graph to represent the input data and then partition it to generate the…

Machine Learning · Computer Science 2019-12-17 Yuheng Jia , Hui Liu , Junhui Hou , Sam Kwong

In a knowledge discovery process, interpretation and evaluation of the mined results are indispensable in practice. In the case of data clustering, however, it is often difficult to see in what aspect each cluster has been formed. This…

Artificial Intelligence · Computer Science 2011-09-01 Yoshitaka Kameya , Satoru Nakamura , Tatsuya Iwasaki , Taisuke Sato

We present ClusterVO, a stereo Visual Odometry which simultaneously clusters and estimates the motion of both ego and surrounding rigid clusters/objects. Unlike previous solutions relying on batch input or imposing priors on scene structure…

Computer Vision and Pattern Recognition · Computer Science 2020-03-31 Jiahui Huang , Sheng Yang , Tai-Jiang Mu , Shi-Min Hu

Financial cluster analysis allows investors to discover investment alternatives and avoid undertaking excessive risks. However, this analytical task faces substantial challenges arising from many pairwise comparisons, the dynamic…

Human-Computer Interaction · Computer Science 2025-05-05 Wong Kam-Kwai , Yan Luo , Xuanwu Yue , Wei Chen , Huamin Qu

Despite tremendous advancements in Artificial Intelligence, learning from large sets of data in an unsupervised manner remains a significant challenge. Classical clustering algorithms often fail to discover complex dependencies in large…

Machine Learning · Computer Science 2023-07-18 Adam Piróg , Halina Kwaśnicka

Clustering is one of the fundamental tasks in computer vision and pattern recognition. Recently, deep clustering methods (algorithms based on deep learning) have attracted wide attention with their impressive performance. Most of these…

Computer Vision and Pattern Recognition · Computer Science 2021-06-14 Yanhai Gan , Xinghui Dong , Huiyu Zhou , Feng Gao , Junyu Dong

Clustering is an unsupervised machine learning method grouping data samples into clusters of similar objects. In practice, clustering has been used in numerous applications such as banking customers profiling, document retrieval, image…

Computer Vision and Pattern Recognition · Computer Science 2021-07-06 Raphaël Couturier , Hassan N. Noura , Ola Salman , Abderrahmane Sider

Clustering is a popular machine learning technique for data mining that can process and analyze datasets to automatically reveal sample distribution patterns. Since the ubiquitous categorical data naturally lack a well-defined metric space…

Machine Learning · Computer Science 2025-09-01 Yiqun Zhang , Mingjie Zhao , Hong Jia , Yang Lu , Mengke Li , Yiu-ming Cheung

We propose a computationally simple framework for clustering functional data based on Gaussian-process-generated random projections. In this approach, each curve is first projected onto a large collection of independent Gaussian process…

Methodology · Statistics 2026-05-22 Sourav Chakrabarty , Anirvan Chakraborty , Shyamal K. De

partycls is a Python framework for cluster analysis of systems of interacting particles. By grouping particles that share similar structural or dynamical properties, partycls enables rapid and unsupervised exploration of the system's…

Computational Physics · Physics 2021-11-22 Joris Paret , Daniele Coslovich

Multiple clustering aims to discover various latent structures of data from different aspects. Deep multiple clustering methods have achieved remarkable performance by exploiting complex patterns and relationships in data. However, existing…

Machine Learning · Computer Science 2024-11-07 Jiawei Yao , Qi Qian , Juhua Hu

In several environmental applications data are functions of time, essentially con- tinuous, observed and recorded discretely, and spatially correlated. Most of the methods for analyzing such data are extensions of spatial statistical tools…

Methodology · Statistics 2011-06-28 Elvira Romano , Antonio Balzanella , Rosanna Verde

Visual clustering is a common perceptual task in scatterplots that supports diverse analytics tasks (e.g., cluster identification). However, even with the same scatterplot, the ways of perceiving clusters (i.e., conducting visual…

Human-Computer Interaction · Computer Science 2023-08-14 Hyeon Jeon , Ghulam Jilani Quadri , Hyunwook Lee , Paul Rosen , Danielle Albers Szafir , Jinwook Seo

Hierarchical clustering is one of the standard methods taught for identifying and exploring the underlying structures that may be present within a data set. Students are shown examples in which the dendrogram, a visual representation of the…

Other Statistics · Statistics 2022-06-06 Andee Kaplan , Jacob Bien

We address the problem of un-supervised soft-clustering called micro-clustering. The aim of the problem is to enumerate all groups composed of records strongly related to each other, while standard clustering methods separate records at…

Data Structures and Algorithms · Computer Science 2016-06-07 Takeaki Uno , Hiroki Maegawa , Takanobu Nakahara , Yukinobu Hamuro , Ryo Yoshinaka , Makoto Tatsuta

Biologists often perform clustering analysis to derive meaningful patterns, relationships, and structures from data instances and attributes. Though clustering plays a pivotal role in biologists' data exploration, it takes non-trivial…

Human-Computer Interaction · Computer Science 2019-11-05 Bahador Saket , Subhajit Das , Bum Chul Kwon , Alex Endert
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