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Time series forecasting is an extensively studied subject in statistics, economics, and computer science. Exploration of the correlation and causation among the variables in a multivariate time series shows promise in enhancing the…

Machine Learning · Computer Science 2021-04-22 Chao Shang , Jie Chen , Jinbo Bi

Formation of a molecular network from multifunctional precursors is modelled with a random graph process. The random graph model favours reactivity for monomers that are positioned close in the network topology, and disfavours reactivity…

Soft Condensed Matter · Physics 2019-08-21 Ivan Kryven , Jorien Duivenvoorden , Joen Hermans , Piet D. Iedema

Networks are a widely used and efficient paradigm to model real-world systems where basic units interact pairwise. Many body interactions are often at play, and cannot be modelled by resorting to binary exchanges. In this work, we consider…

Adaptation and Self-Organizing Systems · Physics 2020-06-03 Timoteo Carletti , Duccio Fanelli , Sara Nicoletti

A book Chapter consisting of some of the main areas of research in graph theory applied to physics. It includes graphs in condensed matter theory, such as the tight-binding and the Hubbard model. It follows the study of graph theory and…

Mathematical Physics · Physics 2013-06-19 Ernesto Estrada

We present a new probabilistic modelling framework based on the recent notion of normal factor graph (NFG). We show that the proposed NFG models and their transformations unify some existing models such as factor graphs, convolutional…

Information Theory · Computer Science 2012-09-17 Ali Al-Bashabsheh , Yongyi Mao

In the framework of on nonassociative geometry, we introduce a new effective model that extends the statistical treatment of complex networks with hidden geometry. The small-world property of the network is controlled by nonlocal curvature…

Physics and Society · Physics 2020-03-11 Alexander I. Nesterov , Pablo Héctor Mata Villafuerte

Heterogeneous graph representation learning aims to learn low-dimensional vector representations of different types of entities and relations to empower downstream tasks. Existing methods either capture semantic relationships but indirectly…

Machine Learning · Computer Science 2025-08-14 Hao Xu , Shengqi Sang , Peizhen Bai , Laurence Yang , Haiping Lu

The study of hypergraphs has received a lot of attention over the past few years, however up until recently there has been no interest in systems where higher order interactions are not undirected. In this article we introduce the notion of…

Mathematical Physics · Physics 2024-08-28 Gonzalo Contreras-Aso , Regino Criado , Miguel Romance

In this paper we explore mathematical tools that can be used to relate directed and undirected random graph models to each other. We identify probability spaces on which a directed and an undirected graph model are equivalent, and…

Probability · Mathematics 2025-03-03 Mike van Santvoort , Pim van der Hoorn

Dense subgraph discovery is a fundamental problem in graph mining with a wide range of applications \cite{gionis2015dense}. Despite a large number of applications ranging from computational neuroscience to social network analysis, that take…

Social and Information Networks · Computer Science 2021-12-08 Tianyi Chen , Francesco Bonchi , David Garcia-Soriano , Atsushi Miyauchi , Charalampos E. Tsourakakis

We discuss methods for visualizing neural network decision boundaries and decision regions. We use these visualizations to investigate issues related to reproducibility and generalization in neural network training. We observe that changes…

The acknowledged model for networks of collaborations is the hypergraph model. Nonetheless when it comes to be visualized hypergraphs are transformed into simple graphs. Very often, the transformation is made by clique expansion of the…

Social and Information Networks · Computer Science 2017-07-04 Xavier Ouvrard , Jean-Marie Le Goff , Stéphane Marchand-Maillet

Network topologies can be non-trivial, due to the complex underlying behaviors that form them. While past research has shown that some processes on networks may be characterized by low-order statistics describing nodes and their neighbors,…

Physics and Society · Physics 2019-10-22 Xin-Zeng Wu , Allon G. Percus , Keith Burghardt , Kristina Lerman

This paper builds on the connection between graph neural networks and traditional dynamical systems. We propose continuous graph neural networks (CGNN), which generalise existing graph neural networks with discrete dynamics in that they can…

Machine Learning · Computer Science 2020-07-17 Louis-Pascal A. C. Xhonneux , Meng Qu , Jian Tang

Graphs are naturally sparse objects that are used to study many problems involving networks, for example, distributed learning and graph signal processing. In some cases, the graph is not given, but must be learned from the problem and…

Machine Learning · Statistics 2017-08-31 Martin Sundin , Arun Venkitaraman , Magnus Jansson , Saikat Chatterjee

Understanding and interacting with everyday physical scenes requires rich knowledge about the structure of the world, represented either implicitly in a value or policy function, or explicitly in a transition model. Here we introduce a new…

In the last decade, subgraph detection and enumeration have emerged as a central problem in distributed graph algorithms. This is largely due to the theoretical challenges and practical applications of these problems. In this paper, we…

Distributed, Parallel, and Cluster Computing · Computer Science 2026-02-23 Duncan Adamson , Will Rosenbaum , Paul G. Spirakis

Representation learning is the foundation for the recent success of neural network models. However, the distributed representations generated by neural networks are far from ideal. Due to their highly entangled nature, they are di cult to…

Machine Learning · Computer Science 2016-02-09 William Whitney

Graph embedding is a transformation of nodes of a network into a set of vectors. A good embedding should capture the underlying graph topology and structure, node-to-node relationship, and other relevant information about the graph, its…

Social and Information Networks · Computer Science 2021-12-02 Bogumił Kamiński , Łukasz Kraiński , Paweł Prałat , François Théberge

Graphical network inference is used in many fields such as genomics or ecology to infer the conditional independence structure between variables, from measurements of gene expression or species abundances for instance. In many practical…

Methodology · Statistics 2018-03-22 Geneviève Robin , Christophe Ambroise , Stéphane Robin