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We establish the geometric ergodicity of the preconditioned Hamiltonian Monte Carlo (HMC) algorithm defined on an infinite-dimensional Hilbert space, as developed in [Beskos et al., Stochastic Process. Appl., 2011]. This algorithm can be…

Statistics Theory · Mathematics 2020-03-19 Nathan E. Glatt-Holtz , Cecilia F. Mondaini

Popular clustering algorithms based on usual distance functions (e.g., Euclidean distance) often suffer in high dimension, low sample size (HDLSS) situations, where concentration of pairwise distances has adverse effects on their…

Methodology · Statistics 2019-05-03 Soham Sarkar , Anil K. Ghosh

The problem of finding \emph{distance} between \emph{pattern} of length $m$ and \emph{text} of length $n$ is a typical way of generalizing pattern matching to incorporate dissimilarity score. For both Hamming and $L_1$ distances only a…

Data Structures and Algorithms · Computer Science 2018-05-04 Przemysław Uznański

Correlation Clustering is a fundamental and widely-studied problem in unsupervised learning and data mining. The input is a graph and the goal is to construct a clustering minimizing the number of inter-cluster edges plus the number of…

Data Structures and Algorithms · Computer Science 2025-11-05 Nairen Cao , Vincent Cohen-Addad , Shi Li , Euiwoong Lee , David Rasmussen Lolck , Alantha Newman , Mikkel Thorup , Lukas Vogl , Shuyi Yan , Hanwen Zhang

Given a set $F$ of $n$ positive functions over a ground set $X$, we consider the problem of computing $x^*$ that minimizes the expression $\sum_{f\in F}f(x)$, over $x\in X$. A typical application is \emph{shape fitting}, where we wish to…

Machine Learning · Computer Science 2016-05-31 Dan Feldman , Michael Langberg

This paper presents new parallel algorithms for generating Euclidean minimum spanning trees and spatial clustering hierarchies (known as HDBSCAN$^*$). Our approach is based on generating a well-separated pair decomposition followed by using…

Data Structures and Algorithms · Computer Science 2021-04-05 Yiqiu Wang , Shangdi Yu , Yan Gu , Julian Shun

We study the problem of efficiently clustering protein sequences in a limited information setting. We assume that we do not know the distances between the sequences in advance, and must query them during the execution of the algorithm. Our…

Data Structures and Algorithms · Computer Science 2015-03-17 Konstantin Voevodski , Maria-Florina Balcan , Heiko Roglin , Shang-Hua Teng , Yu Xia

We revisit a fundamental problem in string matching: given a pattern of length m and a text of length n, both over an alphabet of size $\sigma$, compute the Hamming distance between the pattern and the text at every location. Several…

Data Structures and Algorithms · Computer Science 2020-01-03 Timothy M. Chan , Shay Golan , Tomasz Kociumaka , Tsvi Kopelowitz , Ely Porat

This paper studies density-based clustering of point sets. These methods use dense regions of points to detect clusters of arbitrary shapes. In particular, we study variants of density peaks clustering, a popular type of algorithm that has…

Data Structures and Algorithms · Computer Science 2025-06-04 Shangdi Yu , Joshua Engels , Yihao Huang , Julian Shun

Parallel Markov Chain Monte Carlo (pMCMC) algorithms generate clouds of proposals at each step to efficiently resolve a target probability distribution. We build a rigorous foundational framework for pMCMC algorithms that situates these…

Sparse Subspace Clustering (SSC) is a state-of-the-art method for clustering high-dimensional data points lying in a union of low-dimensional subspaces. However, while $\ell_1$ optimization-based SSC algorithms suffer from high…

Machine Learning · Computer Science 2018-02-14 Yanxi Chen , Gen Li , Yuantao Gu

We present an $O(1)$-round fully-scalable deterministic massively parallel algorithm for computing the min-plus matrix multiplication of unit-Monge matrices. We use this to derive a $O(\log n)$-round fully-scalable massively parallel…

Data Structures and Algorithms · Computer Science 2024-04-23 Jaehyun Koo

We present $O(\log\log n)$-round algorithms in the Massively Parallel Computation (MPC) model, with $\tilde{O}(n)$ memory per machine, that compute a maximal independent set, a $1+\epsilon$ approximation of maximum matching, and a…

Data Structures and Algorithms · Computer Science 2022-03-21 Mohsen Ghaffari , Themis Gouleakis , Christian Konrad , Slobodan Mitrović , Ronitt Rubinfeld

We propose a multireference linearized coupled cluster theory using matrix product states (MPS-LCC) which provides remarkably accurate ground-state energies, at a computational cost that has the same scaling as multireference configuration…

Chemical Physics · Physics 2015-09-02 Sandeep Sharma , Ali Alavi

We study here the semi-supervised $k$-clustering problem where information is available on whether pairs of objects are in the same or in different clusters. This information is either available with certainty or with a limited level of…

Machine Learning · Computer Science 2024-10-21 Philipp Baumann , Dorit S. Hochbaum

The goal of clustering is to group similar objects into meaningful partitions. This process is well understood when an explicit similarity measure between the objects is given. However, far less is known when this information is not readily…

Machine Learning · Computer Science 2020-10-12 Michaël Perrot , Pascal Mattia Esser , Debarghya Ghoshdastidar

We study graph connectivity problem in MPC model. On an undirected graph with $n$ nodes and $m$ edges, $O(\log n)$ round connectivity algorithms have been known for over 35 years. However, no algorithms with better complexity bounds were…

Data Structures and Algorithms · Computer Science 2018-05-09 Alexandr Andoni , Clifford Stein , Zhao Song , Zhengyu Wang , Peilin Zhong

Markov chain Monte Carlo (MCMC) methods are one of the most popular classes of algorithms for sampling from a target probability distribution. A rising trend in recent years consists in analyzing the convergence of MCMC algorithms using…

Probability · Mathematics 2025-04-30 Federica Milinanni

$ $We study the $d$-Uniform Hypergraph Matching ($d$-UHM) problem: given an $n$-vertex hypergraph $G$ where every hyperedge is of size $d$, find a maximum cardinality set of disjoint hyperedges. For $d\geq3$, the problem of finding the…

Data Structures and Algorithms · Computer Science 2020-09-22 Oussama Hanguir , Clifford Stein

We introduce fast algorithms for correlation clustering with respect to the Min Max objective that provide constant factor approximations on complete graphs. Our algorithms are the first purely combinatorial approximation algorithms for…

Data Structures and Algorithms · Computer Science 2023-01-31 Sami Davies , Benjamin Moseley , Heather Newman