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Hierarchical clustering is a stronger extension of one of today's most influential unsupervised learning methods: clustering. The goal of this method is to create a hierarchy of clusters, thus constructing cluster evolutionary history and…

Data Structures and Algorithms · Computer Science 2021-01-14 MohammadTaghi Hajiaghayi , Marina Knittel

We present new results for LambdaCC and MotifCC, two recently introduced variants of the well-studied correlation clustering problem. Both variants are motivated by applications to network analysis and community detection, and have…

Computational Complexity · Computer Science 2018-09-26 David F. Gleich , Nate Veldt , Anthony Wirth

This paper introduces a novel formulation of the clustering problem, namely the Minimum Sum-of-Squares Clustering of Infinitely Tall Data (MSSC-ITD), and presents HPClust, an innovative set of hybrid parallel approaches for its effective…

Distributed, Parallel, and Cluster Computing · Computer Science 2024-06-26 Ravil Mussabayev , Rustam Mussabayev

Recently, Czumaj et.al. (arXiv 2017) presented a parallel (almost) $2$-approximation algorithm for the maximum matching problem in only $O({(\log\log{n})^2})$ rounds of the massive parallel computation (MPC) framework, when the memory per…

Data Structures and Algorithms · Computer Science 2017-09-15 Sepehr Assadi

Given a text $T$ of length $n$ and a pattern $P$ of length $m$, the approximate pattern matching problem asks for computation of a particular \emph{distance} function between $P$ and every $m$-substring of $T$. We consider a…

Data Structures and Algorithms · Computer Science 2019-07-24 Jan Studený , Przemysław Uznański

Density peaks clustering (DP) has the ability of detecting clusters of arbitrary shape and clustering non-Euclidean space data, but its quadratic complexity in both computing and storage makes it difficult to scale for big data. Various…

Machine Learning · Computer Science 2024-06-19 Ji Xu , Tianlong Xiao , Jinye Yang , Panpan Zhu

We study optimization problems in a metric space $(\mathcal{X},d)$ where we can compute distances in two ways: via a ''strong'' oracle that returns exact distances $d(x,y)$, and a ''weak'' oracle that returns distances $\tilde{d}(x,y)$…

Data Structures and Algorithms · Computer Science 2023-10-25 MohammadHossein Bateni , Prathamesh Dharangutte , Rajesh Jayaram , Chen Wang

With the aggressive scaling of VLSI technology, the explosion of layout patterns creates a critical bottleneck for DFM applications like OPC. Pattern clustering is essential to reduce data complexity, yet existing methods struggle with…

Hardware Architecture · Computer Science 2025-12-16 Shuo Liu

Many of the classic graph problems cannot be solved in the Massively Parallel Computation setting (MPC) with strongly sublinear space per machine and $o(\log n)$ rounds, unless the 1-vs-2 cycles conjecture is false. This is true even on…

Data Structures and Algorithms · Computer Science 2022-11-22 Jacob Holm , Jakub Tětek

Metric clustering is fundamental in areas ranging from Combinatorial Optimization and Data Mining, to Machine Learning and Operations Research. However, in a variety of situations we may have additional requirements or knowledge, distinct…

Machine Learning · Computer Science 2021-03-04 Brian Brubach , Darshan Chakrabarti , John P. Dickerson , Aravind Srinivasan , Leonidas Tsepenekas

In this paper, we propose a unified framework for sampling, clustering and embedding data points in semi-metric spaces. For a set of data points $\Omega=\{x_1, x_2, \ldots, x_n\}$ in a semi-metric space, we consider a complete graph with…

Social and Information Networks · Computer Science 2017-08-02 Chia-Tai Chang , Cheng-Shang Chang

We present $O(\log\log n)$ round scalable Massively Parallel Computation algorithms for maximal independent set and maximal matching, in trees and more generally graphs of bounded arboricity, as well as for constant coloring trees.…

Distributed, Parallel, and Cluster Computing · Computer Science 2020-08-11 Mohsen Ghaffari , Christoph Grunau , Ce Jin

We give an efficient algorithm for Centroid-Linkage Hierarchical Agglomerative Clustering (HAC), which computes a $c$-approximate clustering in roughly $n^{1+O(1/c^2)}$ time. We obtain our result by combining a new Centroid-Linkage HAC…

Data Structures and Algorithms · Computer Science 2024-06-10 MohammadHossein Bateni , Laxman Dhulipala , Willem Fletcher , Kishen N Gowda , D Ellis Hershkowitz , Rajesh Jayaram , Jakub Łącki

The Massively Parallel Computation (MPC) model serves as a common abstraction of many modern large-scale parallel computation frameworks and has recently gained a lot of importance, especially in the context of classic graph problems.…

Data Structures and Algorithms · Computer Science 2018-07-20 Sebastian Brandt , Manuela Fischer , Jara Uitto

Given two algorithms for the same problem, can we determine whether they are meaningfully different? In full generality, the question is uncomputable, and empirically it is muddied by competing notions of similarity. Yet, in many…

Machine Learning · Computer Science 2025-11-03 Shairoz Sohail , Taher Ali

Markov chain Monte Carlo (MCMC) is a powerful methodology for the approximation of posterior distributions. However, the iterative nature of MCMC does not naturally facilitate its use with modern highly parallel computation on HPC and cloud…

Since Hamming distances can be calculated by bitwise computations, they can be calculated with less computational load than L2 distances. Similarity searches can therefore be performed faster in Hamming distance space. The elements of…

Machine Learning · Computer Science 2013-03-19 Yui Noma , Makiko Konoshima

We consider the problem of clustering with the longest-leg path distance (LLPD) metric, which is informative for elongated and irregularly shaped clusters. We prove finite-sample guarantees on the performance of clustering with respect to…

Machine Learning · Statistics 2019-03-07 Anna Little , Mauro Maggioni , James M. Murphy

As it has become common to use many computer cores in routine applications, finding good ways to parallelize popular algorithms has become increasingly important. In this paper, we present a parallelization scheme for Markov chain Monte…

Methodology · Statistics 2016-06-01 Guillaume W. Basse , Natesh S. Pillai , Aaron Smith

We consider the problem of clustering noisy finite-length observations of stationary ergodic random processes according to their generative models without prior knowledge of the model statistics and the number of generative models. Two…

Machine Learning · Computer Science 2017-09-29 Michael Tschannen , Helmut Bölcskei