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Related papers: Statistical Challenges of Big Brain Network Data

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The study of neuronal morphology is important not only for its potential relationship with neuronal dynamics, but also as a means to classify diverse types of cells and compare than among species, organs, and conditions. In the present…

Neurons and Cognition · Quantitative Biology 2024-03-11 Alexandre Benatti , Henrique F. de Arruda , Luciano da F. Costa

In this review, we give an introduction to the structural and functional properties of the biological networks. We focus on three major themes: topology of complex biological networks like the metabolic and protein-protein interaction…

Condensed Matter · Physics 2007-05-23 Indrani Bose

Small-world networks, i.e. networks displaying both a high clustering coefficient and a small characteristic path length, are obliquitous in nature. Since their identification, the "small-worldness" metric, as proposed by Humphries and…

Physics and Society · Physics 2015-05-15 Massimiliano Zanin

Deep learning has arguably achieved tremendous success in recent years. In simple words, deep learning uses the composition of many nonlinear functions to model the complex dependency between input features and labels. While neural networks…

Machine Learning · Statistics 2019-04-16 Jianqing Fan , Cong Ma , Yiqiao Zhong

One of the most significant problems of Big Data is to extract knowledge through the huge amount of data. The usefulness of the extracted information depends strongly on data quality. In addition to the importance, data quality has recently…

Databases · Computer Science 2020-05-25 Mostafa Mirzaie , Behshid Behkamal , Samad Paydar

A fundamental premise of statistical physics is that the particles in a physical system are interchangeable, and hence the state of each specific component is representative of the system as a whole. This assumption breaks down for complex…

Physics and Society · Physics 2025-12-16 Neil G. MacLaren , Baruch Barzel , Naoki Masuda

In this paper, we develop a graphical modeling framework for the inference of networks across multiple sample groups and data types. In medical studies, this setting arises whenever a set of subjects, which may be heterogeneous due to…

The rapid progress of Artificial Intelligence research came with the development of increasingly complex deep learning models, leading to growing challenges in terms of computational complexity, energy efficiency and interpretability. In…

Machine Learning · Computer Science 2023-06-28 Yuanrong Wang , Antonio Briola , Tomaso Aste

In this work we challenge the main conclusions of Gu et al work (Controllability of structural brain networks. Nature communications 6, 8414, doi:10.1038/ncomms9414, 2015) on brain controllability. Using the same methods and analyses on…

Neurons and Cognition · Quantitative Biology 2018-07-10 Chengyi Tu , Rodrigo P. Rocha , Maurizio Corbetta , Sandro Zampieri , Marzo Zorzi , Samir Suweis

Big Data has become the primary source of understanding the structure and dynamics of the society at large scale. The network of social interactions can be considered as a multiplex, where each layer corresponds to one communication channel…

Physics and Society · Physics 2016-12-21 János Török , Yohsuke Murase , Hang-Hyun Jo , János Kertész , Kimmo Kaski

Learning Bayesian networks is often cast as an optimization problem, where the computational task is to find a structure that maximizes a statistically motivated score. By and large, existing learning tools address this optimization problem…

Machine Learning · Computer Science 2013-01-30 Nir Friedman , Iftach Nachman , Dana Pe'er

The field of computational modeling of the brain is advancing so rapidly that now it is possible to model large scale networks representing different brain regions with a high level of biological detail in terms of numbers and synapses. For…

Big data has ushered in a new wave of predictive power using machine learning models. In this work, we assess what {\it big} means in the context of typical materials-science machine-learning problems. This concerns not only data volume,…

We explore a simple mathematical model of network computation, based on Markov chains. Similar models apply to a broad range of computational phenomena, arising in networks of computers, as well as in genetic, and neural nets, in social…

Information Retrieval · Computer Science 2009-04-18 Dusko Pavlovic

Dynamics play a critical role in computation. The principled evolution of states over time enables both biological and artificial networks to represent and integrate information to make decisions. In the past few decades, significant…

Neurons and Cognition · Quantitative Biology 2023-11-28 Jason Z. Kim , Bart Larsen , Linden Parkes

Deep neural networks (DNNs) transform stimuli across multiple processing stages to produce representations that can be used to solve complex tasks, such as object recognition in images. However, a full understanding of how they achieve this…

Neurons and Cognition · Quantitative Biology 2018-11-01 David G. T. Barrett , Ari S. Morcos , Jakob H. Macke

For three decades statistical mechanics has been providing a framework to analyse neural networks. However, the theoretically tractable models, e.g., perceptrons, random features models and kernel machines, or multi-index models and…

Machine Learning · Statistics 2025-06-02 Jean Barbier , Francesco Camilli , Minh-Toan Nguyen , Mauro Pastore , Rudy Skerk

Correlation Networks (CNs) inherently suffer from redundant information in their network topology. Bayesian Networks (BNs), on the other hand, include only non-redundant information (from a probabilistic perspective) resulting in a sparse…

Data Analysis, Statistics and Probability · Physics 2020-11-03 Catharina Graafland , José M. Gutiérrez , Juan M. López , Diego Pazó , Miguel A. Rodríguez

Network theory has unveiled the underlying structure of complex systems such as the Internet or the biological networks in the cell. It has identified universal properties of complex networks, and the interplay between their structure and…

Physics and Society · Physics 2015-09-21 Ginestra Bianconi

Our world produces massive data every day; they exist in diverse forms, from pairwise data and matrix to time series and trajectories. Meanwhile, we have access to the versatile toolkit of network analysis. Networks also have different…

Social and Information Networks · Computer Science 2017-12-29 Jian Xu